2 genomes BUD3519 2 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC0042 - - Hmu1067 - - - -

Pairwise sequence scores
Consensus score	1891	rrnAC0042	Hmu1067
1339	rrnAC0042	1901	712
1264	Hmu1067	712	1865

255 symbols
consensus       MVNKAILAIAALILLTSLGTGVLIGAQLAGGDADATPDTDSSDGQAGDGGGNADSSTATA
#oth            ..1.1111.11111.11..1...1.1.11..1.11111.111.11111...1111.....
rrnAC0042       ::K:GL:::::VV::VV::::::V:::F:::T::T:--:QTT:S:S::::::D:::::::
Hmu1067         ::::::VG:LV::V:::::V:::::T::G::::T:V::::::::S:TG:::D:TT:::::

consensus       SAENATAPEPTAEANATATPQQESIPAREFNEQAIEREVRAAINEEREAAEIEPFRNDLR
#oth            11111.1111.11111....1.111.....11111111.1111..1.1111111.11111
rrnAC0042       T:G:S:T:T::::T:G:::::::::::::::::NVSDY::QFL:::::::GVP::ESG::
Hmu1067         :N:T:::V:S:ET:T:::::V:TTV:::::DSE::::::L:::::K:TER:::T::::TT

consensus       TEQRLREMARSHSQAMAQERKAIHKADGNSSKDRYENAGLYDRCQFQDAEGEDIERPDRN
#oth            .111.11.11...11..1.11111111.1..1....11...1..11111.111.11.11.
rrnAC0042       ::EG:N:::K:::EQ::I:G:::::I::V:::::::DT::::::T:ES::::Y::Q::::
Hmu1067         :W::::T:V:::::::::::SVTFS:G::::S:::::::::G:::Y::P:TG::I::T-:

consensus       RFQAVEKTVAGQAYQEGGQRRFNANDKQVARAIVDNWMASPDYRERLTNRNANILAIGVE
#oth            1.1..11.....1.1...11..111111..111.11.11111..11.11.1111111..1
rrnAC0042       ::E:::::::::P:E:::EE::H:T::E:::K:::D:::W::::::::L:::::VG::::
Hmu1067         K::::GS::::::::::::::::G:ES:::T:L:E::FD:ST::PS:V::GVEL::V::T

consensus       ITDDGRVYAAAAICE
#oth            1..1.1...111..1
rrnAC0042       :::T:N:::T:N::G
Hmu1067         V:::::::::T::::