2 genomes BUD3525 2 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC2337 - - Hmu1478 - - - -

Pairwise sequence scores
Consensus score	3072	rrnAC2337	Hmu1478
2154	rrnAC2337	3019	751
1669	Hmu1478	751	2481

414 symbols
consensus       MELAVRAQVIIMYRGSRARLAPWLLAGFGLAFAGAAILWNLRREIQRIAQAAGPAAALVL
#oth            1111111111111111111111.11111111.1..111.1111.111111111.1111..
rrnAC2337       ::::::::::::::::::::::::::::::::T::::V:H:GI:T:::G:VG:::L::::
Hmu1478         ---------------------V:--------::::--:::F::::STL:G::L:V:TF::

consensus       DGGLPAGLVFGGYRLTQSPFAGDQRWSIFGWSAGGLLATGALHAASLFIRAAEGRPIAEP
#oth            1.1.1111.111...11.1111111.1111.111.1.11111111111..11...1.1..
rrnAC2337       ::L::LV::Y:S:::VS:STP:E:I:TV:V::VI:S::V::VIGL:V:::MM:::T::::
Hmu1478         T:::S::V::V::::::::::P:E::::V::T:::::V:VS::::T:S:::::::::G::

consensus       QFPLLLAGETGALAGLGAGELAVRARRDAARAQRAANGLAFANDLLRHDIANALQVIDGR
#oth            1.11.1.111..11.111.1.1.11.11.11.11111111.1.1.1...11.1.1..1.1
rrnAC2337       V:VT:::M::::VT::I::T::::::Q::S::T:T::T:S:V:::F::::::G:V:::::
Hmu1478         :::::V::GV:::::Y:I:::L:DV::T::Q::Q:RD:M::::S:::::VR::::::L:Q

consensus       ADIIRRNADDDRVQEAADAIEEQAEELDDLTDNAEAVTATLSGDAAFEPRNIVEDAEATI
#oth            11111111.111.11.111.11.111.11.11..1..111.111111..111.1111111
rrnAC2337       :T:::::::S:T::T:::::H::VT:::S:V:::G::VE:::S:P::::TD::GI:G:V:
Hmu1478         V:VL-TTI::E::G::TKR::S:::G:Y:::S:::::::V:T:E:TP::::V:::I:T:V

consensus       ARIEQSHPDATIELAAHDQAMARGNDAARPVLANIIDNAIQHGTPAAELSAEGTATDGAA
#oth            1111111.11.1.1111.11111111.1...11.111..11.111111111111111111
rrnAC2337       Q::::T::-I::::Q:P:S:::YT:E::::::R:L:E:::E:::::::::::::::::::
Hmu1478         :TVTE:F::::V:T:L:::LVV::T::L:::F:::L:::V::------------------

consensus       LPSEAQRAETTELTGDRYHNPSVRVAIREADDVARIRFADDGHGIPDDQRDRIFDRGVPR
#oth            1111111111111..11111.1.1.11111.1.111111...1...111.111.111111
rrnAC2337       :::::::::::::::::::Q:::F:::::T:::IETHVV:::P::::::::SV::---::
Hmu1478         -------------::S---::T:::TTET::G::::::::::::::EGE:E:::E:::TT

consensus       AGDSNGGGLHIVETLVERFDGDISLADTASKTDAAFPDSDLDGAAFVVELPRAE
#oth            1.111.1...1.1...1111.1.111.1111111111111.1..1......1.1
rrnAC2337       :::TH:::::L:::::TS:G::::::::::::::::::T:::::H::::::::-
Hmu1478         D:G:::L:::::S:::::S::S:YVE:-----------:E:G:::::::::I::