2 genomes BUD3540 2 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC1401 - - Hmu1910 - - - -

Pairwise sequence scores
Consensus score	1590	rrnAC1401	Hmu1910
1164	rrnAC1401	1572	721
1147	Hmu1910	721	1559

214 symbols
consensus       MNRRILAAIALAALLVLSGCADAAVDATVAADGTVEEYDLTIEMSPSTYDRLQSQAQDEG
#oth            111.111111111.1.....1111..1..11....11.11.1.....1.11...1.11..
rrnAC1401       -MH::VP::G::::V:::::VT:T::S::::::::S:::::L:::::V::G::::::Q::
Hmu1910         ::::S::TL:VGV:::::::::V::::::DG:::::S:ET:::::::::E::::T:E:::

consensus       YDSVERYLLADVNESRAENYSYNQELADDGNVTLDLRLSDWNPGPESDVETNAEAGNVTF
#oth            .1...1...11..1..11111.1.1.1111...1111111.....1.1.111111....1
rrnAC1401       :::::G:::::::T::MS::T:D:::EGE-::::SMTFT::::::::::SV::SG::::Y
Hmu1910         :G:::::::RG:::::::SV::::S::::::::V:::::S:::::S:G:::TV:::::::

consensus       EDRSFVQANEDTDLAFQNGYALEYQLTMPANISDSNADIVQNATATWRYAADEAIDEPIR
#oth            1..1..111111111111.1.11.11...11111....1.111..1.1.11..1111...
rrnAC1401       :::T::T::::::V::G::V:V::::::::D::S::::::::E::V:E:::::PV:::::
Hmu1910         V::::::NSG--Q:GS:S::::T:TV:::T:VT:::::T:EG:::::::DS::::ES:::

consensus       AQSPAPDSAFGPGMGAPGALAALALAAALLARRA
#oth            .1..1.1.11...1.111.11111.111...1.1
rrnAC1401       :T::::S::::::::I:V:VV::-:G:::::S:D
Hmu1910         ::::V:::GS:::F::V::::GV:::VG::::::