2 genomes BUD3541 2 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC0520 - - Hmu1295 - - - -

Pairwise sequence scores
Consensus score	1112	rrnAC0520	Hmu1295
735	rrnAC0520	1110	231
608	Hmu1295	231	938

142 symbols
consensus       MFMSLNGMDEPRGARERPDAGNAARESLADRVRAAIERLRRAIEAILFRERCFAWLDARG
#oth            1111111111.1111111.1111111.111...111111.111111111..11111111.
rrnAC0520       :::::TP::::::::G:T:D:D:PPP::L::::Y---:V:S:::T:S:G::::::::N::
Hmu1295         ----M::VTT:DLSS:S:::S:D::::V:G:::::::H:::HVG:L:S:::S-----:N:

consensus       RDDQRARRESAAFADDVVAPPECPSIDRLPERARPLTYPDRNHDELNTPDLIAIEGDDQL
#oth            111111111111111.1111111111111.1.11.1...1.11111..1.1.11.11.1.
rrnAC0520       ::KPQSKIHTDG::::::::::::::SD::T:S::F:::T:::T:S::V::::V::G:::
Hmu1295         TS::::::::::YGL:---------L::F::::Q:::::::EL:G:::::V:G::T::G:

consensus       RLSHPDNPDAAITSDIWMDIEQ
#oth            1111...1..111..1.111.1
rrnAC0520       TMT::::S::K::::::::V::
Hmu1295         :::I:::::::VV::V:VP::E