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2 genomes BUD3550 2 proteins
a Hsa
Halobacterium
sp. NRC-1		 b Hma
Haloarcula
marismortui		 f Hvo
Haloferax
volcanii		 g Hbo
Halogeometricum
borinquense		 h Hmu
Halomicrobium
mukohataei		 i Hut
Halorhabdus
utahensis		 j Hla
Halorubrum
lacusprofundi		 q Nph
Natronomonas
pharaonis		 x Hwa
Haloquadratum
walsbyi
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rrnB0073

 - -

Hmu0017

 - - - -

Pairwise sequence scores
Consensus score789 rrnB0073 Hmu0017
548rrnB0073 758 248
489Hmu0017 248 735 

107 symbols
consensus       MLAILQLNIETLRTVRLLLQGSEIVGAALGLAIAYLAFRAYRRNRSRPMLFIAIGFGIIL
#oth            111111111...1..1111.11.1.111...1.1...111..1.1.....11....111.
rrnB0073        ::::::::L:::::::---:V::::PMI:::::S:::YT:::Q:::::::Y:::::ILV:
Hmu0017         ------MT::::G::G:::::Y:L:::::::F:::::::G::::D::::::F::::::::

consensus       GLQAPLAAIFIHILELPGPGGNAIIQIFELAGLGCIIYALWTPRRDP
#oth            1111.1111111111.11.111111.11.11..11.1.1.111.1.1
rrnB0073        FV:::::L:::::::::T:LL:SLL::P:F::::L:L:G:::::::-
Hmu0017         ::PL:VV:LSLVFPW:S::::Q::::T:::V::V::::::---:M::