Home |  Text search
2 genomes BUD3551 2 proteins
a Hsa
Halobacterium
sp. NRC-1		 b Hma
Haloarcula
marismortui		 f Hvo
Haloferax
volcanii		 g Hbo
Halogeometricum
borinquense		 h Hmu
Halomicrobium
mukohataei		 i Hut
Halorhabdus
utahensis		 j Hla
Halorubrum
lacusprofundi		 q Nph
Natronomonas
pharaonis		 x Hwa
Haloquadratum
walsbyi
-

rrnAC2952

 - -

Hmu2883

 - - - -

Pairwise sequence scores
Consensus score1529 rrnAC2952 Hmu2883
1152rrnAC2952 1525 631
1008Hmu2883 631 1509 

209 symbols
consensus       MSPDQQRDDGIADAIISDSAYERLRYERDSLLRQPIPRKLALQGALLAALAALLPLYGLY
#oth            ..111.11.1.11.11.1.1...1.11.1.111.11.11.11.11..11..111.1.1..
rrnAC2952       ::T:S:P::T::Q::::G:T::::::::H:Y:::TV::T::::S:::G:::L:::V::::
Hmu2883         :::E:::S:::T::VL:::::::V:VL::::FT::::W::RV::L:::V:::TV:::W::

consensus       PDSTAAFLPSINPDLASPKVALLGAFGGFLQLFGAALLVGAALYRVRHAPLTERQAHAAL
#oth            ...1111.1111.11.1...1...1...111..1.1....11....11.....1..111.
rrnAC2952       ::::::::::::::::::::L:::V::::::::::T::::SV:::::L::::::::::::
Hmu2883         :::VTGY:TTTD:MT:T:::::::::::TMV::S::::::::::::E::::::Q::YQV:

consensus       NAEDFARGVGLAMGGLAIAISLCLIAMGLGGGDAVGAYIAFMGRNPLAASGFGLSLAAVG
#oth            11....11.1.11..1..1111111.1..1.....11.1.11.1..111.11...111.1
rrnAC2952       :::::::Y:::GT:::::VL::::F:V::::::::S:::::T::::FV:::::::V:::S
Hmu2883         TV::::G::S:::::F::::TTGS:::::F::::::S:V:T::Q::::G:VY::::GS::

consensus       IGALSASATVLYAHRYLDRRLARLHRSSE
#oth            11.11..11.11.11.1111111111111
rrnAC2952       LF:FV::V::F::S:::LVH::LF:::::
Hmu2883         ::::::::V::V::W:V:::FR::-----