Home |  Text search
2 genomes BUD3552 2 proteins
a Hsa
Halobacterium
sp. NRC-1		 b Hma
Haloarcula
marismortui		 f Hvo
Haloferax
volcanii		 g Hbo
Halogeometricum
borinquense		 h Hmu
Halomicrobium
mukohataei		 i Hut
Halorhabdus
utahensis		 j Hla
Halorubrum
lacusprofundi		 q Nph
Natronomonas
pharaonis		 x Hwa
Haloquadratum
walsbyi
-

rrnAC1052

 - -

Hmu0052

 - - - -

Pairwise sequence scores
Consensus score1467 rrnAC1052 Hmu0052
894rrnAC1052 1424 398
971Hmu0052 398 1367 

195 symbols
consensus       MDRRAEDFAEALASGDSDRVNDAIDDIEAMELAERSEQFNACFDACHQLYEAADDGYVRQ
#oth            .111111..11.1..1..1..11..1.1111111.1.11111..11111..11.......
rrnAC1052       :HQ:WS:::PE:E::E::::::V::::SN:S:S::::L::G:::EVV:::::::::::::
Hmu0052         :::S::S:::::::::::S::E:::E:::V:S:L:V::YG:L:::::PV::S-:::::::

consensus       SVVRFARDAAPGLEITIAADNRDRSDAIDEADLRDNRDALCEFLLDALGDDDGRVRRAAK
#oth            ....111111.1.1111.11111.111111111111111.11...1..1.......1..1
rrnAC1052       ::::V:DQL::::P:VT:L::D:::I:::::TFQ:QT::::G:::E::T:::::::Q:::
Hmu0052         :::::L:::Y:M::L::::SE:E:V:GYTIG:::E::TR:V::::::::::::::::::V

consensus       RGLDDLGRAIDAADDDAELRALLDELDDLADDLPEEQAKHAREARQDAKFSLQSGVARMG
#oth            1.11111111.1111111111.11...11.1111111...11..11111111111...11
rrnAC1052       :::K:VF:TY::L::EET:E::VI:::EM:GETSGT::::L:::KE::::::::::::--
Hmu0052         D:F:T::V:::L:EI:::K:V:::::::::::::::K::::E::::--------S:::::

consensus       LVEGLEGDLDDDIPR
#oth            ..1111.11111111
rrnAC1052       ::::F::EFG:S:--
Hmu0052         ::GS:V::::L:V::