2 genomes BUD3554 2 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC2309 - - Hmu0078 - - - -

Pairwise sequence scores
Consensus score	1348	rrnAC2309	Hmu0078
1124	rrnAC2309	1341	916
1140	Hmu0078	916	1301

181 symbols
consensus       MLQHTMADAPHGVDDPPVNDPVDELSEAEEFDSLAGILADGVVGAAGGLVGTALMTVVLL
#oth            11111.1.111..1.1..1.11.1.1.1......1..11..............11...1.
rrnAC2309       ::::::E:TSS::E::::::--:G:T:::::::::::::::::::::::::::M::::F:
Hmu0078         -----::::::::::-::D::::::::T::::::I::VG:::::::::::::::S:::::

consensus       IAQSLGAFNREAFAILTELVGIEELVPEILAGFLIFLAGGMFPWPLLFASLKAYLPGRRD
#oth            ..1...1.1111..1......1111..11.1.11...1...1.....11...1....11.
rrnAC2309       :::::::::L:D:::::::::LTGY:::V:F::F:::G:::::::::::::::::::QS:
Hmu0078         ::E:::V:E:S:::L::::::::::::P::::Y::::::::V:::::YV:::E:::::::

consensus       PVSGAFFGAAIWTGFALAFYTGQSGLALVGYAVLTLLAHIVYGIGLGAVFNYFQSRPDSI
#oth            ....1...1.1....1.1........1..1......1..1...1...1..1..11..1..
rrnAC2309       ::::V:::::M::::V::::::::::M::L::::::V::::::::::::::::ST:::::
Hmu0078         ::::::::F::::::::G:::::::::::::::::::::V:::V:::L::E::::::S::

consensus       V
#oth            .
rrnAC2309       :
Hmu0078         :