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2 genomes BUD3558 2 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC1354

- -

Hmu1872

- - - -

Pairwise sequence scores
Consensus score3075 rrnAC1354 Hmu1872
2003rrnAC1354 2861 1239
2311Hmu1872 1239 3045

415 symbols
consensus       MAMLLPNSLGLRARLAALVAGLVAFDAVAVAAAYWLGHLAAGLLPLAIGYDSAGLLFDAL
#oth            11111111111.1..1...11..1....1.111.1...1.1..111111.111.111111
rrnAC1354       ::S::STTWS:::::L:::V:::V:::::::V::V:::V:F:::::-V:::T-:T::WTM
Hmu1872         -M:PS:::::T:F:::::::L:::::::F:V:V::::::::::FSW::T:E::::VV:::

consensus       QFRILPLPLVIAVGTAATLAGQSIFGYRMSANTLRGQRQTFRDLFAPVADPVEPGQPFAG
#oth            1.111.111.11...111..1..11....111.11.11111111111111111111111.
rrnAC1354       G:D:V::WP::L:::PLV::V:::Y::::---::::----------------------::
Hmu1872         :::T::S:::V::::::::::::V:::::::::VP:::::::::::::::::::::::G:

consensus       LLADRSRASDADDEDERRARVRRSFDYGETADRLAARLARLAQLADMAIPDVRVIDAEAP
#oth            11.11.1.111111..1111.1111111.111.111.111...11.111...1.1.1.1.
rrnAC1354       TT:TE:::::PESI::M::E::::----::::::QG:V:::::T::::T:::T:::::::
Hmu1872         ::::::H:VS:::::::DP::VPT:::::YRE:V::::TG::::S:TP::::::V:S:T:

consensus       NSYVAGRPGEQILFVTTALLRQLDDAELDAVIAHELAHIKNGDAFVMTAAAFLPTVSALF
#oth            .....1.....1.1...1.111...1.....1......1.1.........1.....1.11
rrnAC1354       :::::S:::::T:::::::VD:::::::::::::::::L:::::::::::::::::::::
Hmu1872         :::::::::::::V:::G:::T:::E:::::L::::::::H:::::::::G:::::T:--

consensus       TRTNGGTIQFLRRSGLCHLFGGEQDRDGDTFAGGNIQIAMLALAAIAIALSAALWLASTA
#oth            1.11.1.111111...1111111111.1111.1.11111.11111.1111111.1.....
rrnAC1354       :::L:K:V:Y---:::::W:L:GE::::TW::::::::V::LF:::::PVT:T:Y:::::
Hmu1872         -:V:::::E:::::::GY:P:V::PE:S::V:F:QFHV::V::SP:VL:::S::::::::

consensus       CYRLLSRIREFAADAGAAAIRGSPAALAGALETLEDSQRPDEDIRTAQTGVRELCVLPDA
#oth            ...1...1..11....11..1......11.....1.11..11.1...1........1.1.
rrnAC1354       ::::::::::Y:::::GV::C:::::::S:::::T::::::T:::::E::::::::V:H:
Hmu1872         :::S:::V:::H:::::::::::::::V::::::::-L::S::L::::::::::::::::

consensus       IADDDQIDGDDAAARLARRWRSVAARALPGSHPAIDDRIAALRERQRTGRRHEQP
#oth            .1111111111111.111...1.11.1..1...1111.11..1.111.1111111
rrnAC1354       ::P:E:TPPEGR:E:::H:::T:TE:V:::::::V::::D::T:::S:LDQ::::
Hmu1872         :D:E:G::::::I::TR::::::::::::S:::P:ES:V:::::QE:::::----