2 genomes BUD3562 2 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC0950 - - Hmu1759 - - - -

Pairwise sequence scores
Consensus score	3354	rrnAC0950	Hmu1759
2641	rrnAC0950	3371	1773
2486	Hmu1759	1773	3296

444 symbols
consensus       MGRRATRWRAAIAAALALAAAGIWARNGALLLAATLPLSYLAYGLLSSAAGPAALSVSRA
#oth            .1.11....1111..111.1..11111.1.....11..1....11111111111.1.1.1
rrnAC0950       :::::::::G::V::::::G::::EG::T:::::::::::::::V::T::V::::V::::
Hmu1759         :S:QS:::::TV:::TLF::::LV::S:::::::VV::V::::S:VT:GP:SVS:::T:H

consensus       VDPELAPPGHPVHVQLELTNEGDRPLSDLRVVDAVPADLAVLRGSPRGGEALAAGASTTI
#oth            .1.111...1..1.1.11..1.1111..1....1..1....11....1.11.1..111..
rrnAC0950       :::TP:::::::T:::TV::S:QQT:::V::::G::T:::::D:::::::T::::E:V::
Hmu1759         :E:::S:::T::::T::::::::::V:::::::::::::::T:::::T:V::E:::T:::

consensus       EYTLIARRGEHDFDEPRLRVRGLGAGEVATARRHPGGDDRLVCRLDADAPPIDDRGADRV
#oth            ..1......1.1.11..1...11.111.1.111111..1....1...1...11.1.111.
rrnAC0950       ::::::::::::::::::::::T::::::::T:::::::::::Q:::Q:::LS:::T:::
Hmu1759         ::V::::::V:E:EP::V:::S::GTS:T:L:PTVS::T:::::::::::::::Q::QF:

consensus       GDLTTDAPGDGLTFHSTREYRRGDDARRIDWRGYAKRGELSTINYERRRAASVVLVVDAR
#oth            .1....1..1.1........1...1.1.....1...1...1.11..111111..1.....
rrnAC0950       :Q:::::::::F::::::::Q:::P:G:::::::::::::::V:::QWVSTT::F:::::
Hmu1759         ::::::E::E::::::::::::::::::::::T:::T:::T::D::::::::::::::::

consensus       RIARVSAGPGRPTAVELGAYAATQALTDLLAAGHDVGLAIIGADGDGPAGLHWLAPEDGD
#oth            111..1...........1...1.1.1.11111..1..1.11.1..1.....1..1.11.1
rrnAC0950       SP:::T:::::::::::::::T:::::S::D:::E:::::V:I::::::::T::Q:G::P
Hmu1759         ::S::::::::::::::S:::::H:V::FV:S:::::V:V:::::P:::::::::::S::

consensus       NQRSRAIDQLRAAADAAEGAPAGGPADEADIDRQLAELLDLAGPRAQLALFSPLLDDAPV
#oth            1...1.1111.1.1111111.11111111.11..111111111.11..1.1......1..
rrnAC0950       ::::L:VE::::::::::SD::::::::::TQ::FRKVMEM::::C::V:V:::::::::
Hmu1759         G:::::::YF:T:TEVTG:::--------::::::::::::VP:G::::::::::::L::

consensus       EAMAAWAAQDCQATVLSPDVTAANTVGGQFEQVRRRTRLARCQASGARAIDWRRGTPLPL
#oth            1.111.11111111...1..1111..1..1.1.1.1........1...11.........1
rrnAC0950       T:::S:::F:::R::::T:::::S::S::Y:H::::::::::::::::T:::::::::::
Hmu1759         ::VQ::RS:GYP:V::::::VTD::::::::::Q:Y::::::::T::::T:::::::::M

consensus       ALAYAFAAAARQPSQRAQGGGGAP
#oth            1.1....11..1..111111..11
rrnAC0950       I:D::::V::::::GS::L::::-
Hmu1759         ::::::::D::L::::PT:T::V: