2 genomes BUD3564 2 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC2331 - - Hmu1937 - - - -

Pairwise sequence scores
Consensus score	1393	rrnAC2331	Hmu1937
1116	rrnAC2331	1391	923
1200	Hmu1937	923	1383

189 symbols
consensus       MGMSDDPAHERMARHAQLAREAADRAAERDAVAAEVQDRLADAIAEAIAEAGTNIGALDR
#oth            11.111.1..1.11111.11.111111.....111.1......11..111..111.1111
rrnAC2331       :::TEE::::Q:EH::T:TD:L::LD::::::::S::::::::VS::::K::::V:S:GQ
Hmu1937         --:::::L::::::YE::::::RE::S:::::GD::G::::::::::VD:::VS:::V::

consensus       SRDGHRFRFEARLDRAALVAALTDALPAGFVVSHVNDDGSLSIDWTGDDRTPSKREHGAI
#oth            .1..111..1...........1.1...1........1..1..11...111.........1
rrnAC2331       :K::K::::::::::::::::V:E:::D::::::::E::T::V:::::ST::::::::::
Hmu1937         :::::HY::T:::::::::::::::::::::::::::::::::E:::S:::::::::::V

consensus       LKAIIAEATETDADGLIESVPSRDAVLARAEQLGIDREDAADRLSRLATLDVVDIADERV
#oth            ....1..1....1..1.......11..1..11..1.1..................1.11.
rrnAC2331       :::::::E::::R::F::::::::R:::::VE::V:E::::::::::::::::::T::G:
Hmu1937         ::::V::::::::::::::::::T:::D:::::::::::::::::::::::::::::G::

consensus       YPDENFSRY
#oth            ...1.....
rrnAC2331       :::::::::
Hmu1937         :::T:::::