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2 genomes BUD3566 2 proteins
a Hsa
Halobacterium
sp. NRC-1		 b Hma
Haloarcula
marismortui		 f Hvo
Haloferax
volcanii		 g Hbo
Halogeometricum
borinquense		 h Hmu
Halomicrobium
mukohataei		 i Hut
Halorhabdus
utahensis		 j Hla
Halorubrum
lacusprofundi		 q Nph
Natronomonas
pharaonis		 x Hwa
Haloquadratum
walsbyi
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rrnAC2151

 - -

Hmu3018

 - - - -

Pairwise sequence scores
Consensus score1959 rrnAC2151 Hmu3018
1290rrnAC2151 1664 735
1404Hmu3018 735 1948 

262 symbols
consensus       MPETRQSRIEHALELLDREVTYASDERSAFERFRSRMRSIDPTAQRAGGVDAGGGGMSAL
#oth            11111111111111111111111111111111111111111..111111.111...11.1
rrnAC2151       ------------------------------------:V::E::::S::T::TS::::::F
Hmu3018         ::::::::::::::::::::::::::::::::::::V:TL:::SP:DP::Q:::::VV::

consensus       EARAPKPDAAARAVRQAYRETVLAVPHFEAEYDDSLRANMEAEFGPELATQIAEGGRLTA
#oth            1111.1..111.1..1..1...11.1......111.11.111.1.1.111.11111.1.1
rrnAC2151       S::Q::::TSL::::E::::::M:::::::::::::E:::SM::::::G::::T:T::::
Hmu3018         :T-::P::::::T:::::D::::S:S::::::GET::Q:F:::V:T:V:V:VF:T::V:P

consensus       QLHDALLAASEQARDEREMLLEALRRERESLCRARARLDDCERRAAALGARARRTDDPAR
#oth            1111...1.1.1.11..111.11.11.....111111.....1...1..11111.11.1.
rrnAC2151       ::YE:::T:::G:::::::::P::E::::::QSVQ:T:::::::::::::N::::T::::
Hmu3018         PV:::::::T:::IE::TTY::T::T:::::::::D::::::S:::E::T:LTT::S:D:

consensus       LDGIDDQLAEIEANCEAAAATRQQQLHGRSAAALSGIDGESLVRFLYAECPATCPALADA
#oth            111..1..111..1..11.1...11..1..1.1.1.11.11..11..11.11...1.1.1
rrnAC2151       ::T::::::::::::::::::::::::S::::::::V::T::::Y::DG::V:::::V:T
Hmu3018         -S:::E::QSL::V::GV:E:::EL:::::T:Q:V::S::T::Q::::::T::::V::::

consensus       ADCIDTIRRQRRRCITLPAATS
#oth            11.11...11..1.111111..
rrnAC2151       VT:L:::::H::H::---VS::
Hmu3018         ::::E:::H:::::L:::::::