2 genomes BUD3570 2 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC0135 - - Hmu2534 - - - -

Pairwise sequence scores
Consensus score	1857	rrnAC0135	Hmu2534
1456	rrnAC0135	1828	1203
1604	Hmu2534	1203	1862

234 symbols
consensus       MCGRYSLFAPREDIEERFDAEFAQAYEPRYNAAPRQDLPVITADEPGTIQRMEWGLIPSW
#oth            ........1...1..1..1.1.111..1......1.1.....111.............1.
rrnAC0135       ::::::::S:::E::T::::::SFD::S::::::S:::::::DES:::::::::::::T:
Hmu2534         ::::::::::::::::::G:T:::::::::::::::S:::::::::::::::::::::::

consensus       ADDRGDHEHINARAETLAEKRSFAEAYEQRRCLVPADGFYEWREEGGEKQPYRVARDDDR
#oth            ..1.11111.......11..........1.............1.1111......111.11
rrnAC0135       ::S:T::G::::::::::::::::::::S:::::::::::::V:TS:G:::::::LP::D
Hmu2534         :::::EF:F:::::::VT::::::::::::::::::::::::::::T:::::::T:::Q:

consensus       LFAMAGLWERWRPPQRQTGLGEFGARGDDEGDEADIVESFTILTTEPNEAVADLHHRMAV
#oth            1......1...1............11111111.111..1..11......1.11.....1.
rrnAC0135       :::::::Y:::K:::::::::::::S:G:S:G:D::::::::V:::::::::::::::::
Hmu2534         P:::::::::::::::::::::::T:T:G:H:::TT::T::V:::::::F:RE:::::S:

consensus       ILDPGEEAIWLRGDADDRAALLDPYDGELAARPVSSAVNDPANDSPALIDAPGA
#oth            ....1..11..1.11.1111..1....11111...1...1.1....111111.1
rrnAC0135       ::::S::ST::::S:::V:T:::::::SMQTY:::::::S::::::E::EPV:-
Hmu2534         :::::::::::H::D:E:R:::E::::::::::::T:::::S:::::VL:::::