2 genomes BUD3578 2 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC1248 - - Hmu1722 - - - -

Pairwise sequence scores
Consensus score	1388	rrnAC1248	Hmu1722
993	rrnAC1248	1334	602
997	Hmu1722	602	1334

186 symbols
consensus       LTVRKDKPMNDRAQTPQDFAVGVAVLLLTIIATLAFIQNSAVGTYDRPDSQRNQEIADRA
#oth            11111111111.1..........1...1...1111.1.1.1.11.11.11111.11...1
rrnAC1248       --------:DS::::::::::::S:::V:::GV:::V:G::::V:ES::V::::P:::::
Hmu1722         ::::::::T:::G::::::::::::::::::::FV:::::V:T:::::V:GDV::S:::V

consensus       ASYLVENHSVEDKRNIIRYNSSDGINQSLNRDIAKHSDSLDRLRAGAGLDTATDRRINAS
#oth            .1.1...1...111.11..11.1..11...1.1111111.11.111....1..1..1.11
rrnAC1248       :T:::::::::GT::L::::T:G:::E:::N::::::GT:GD:KSS:::::::Q::T::T
Hmu1722         :::V:::Y:::::D::L::D:::::E::::::----T:::::::::::::V:::::::L:

consensus       INVSVVNADALAAGSRDPATDDHDQRLAWGEAYANRDNAASAARVVKLENASGQCDPNCL
#oth            1..1..1111.11.1.1..1111111.1..111111.11.111...1.111111.111.1
rrnAC1248       L:::::::SS:K::T::::V::::::::::PDV:D:::V:T:S:::::T::T:::::V:W
Hmu1722         :::T::GS::::D:::K:::GISGE-:T:::::K:Q:G:::T::::T::DE:TI:SS:::

consensus       LVVRVW
#oth            ......
rrnAC1248       ::::::
Hmu1722         ::::::