2 genomes BUD3586 2 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC1159 - - Hmu0744 - - - -

Pairwise sequence scores
Consensus score	3201	rrnAC1159	Hmu0744
2501	rrnAC1159	3185	1875
2575	Hmu0744	1875	3144

414 symbols
consensus       MTWEFEAGDLIAGQYRIAEEAGKGGFAKAFRAIDEDSGDSVAVKYPNYAESQNDRDIIEQ
#oth            ..111.1..11....111111.1....1.11.1.111.11....1...11.1..1.1..1
rrnAC1159       ::::P:S::V:::::KL::FL:::::::::::K:TET:E:::::::::T:::::P::::E
Hmu0744         ::-T::::::V::::::QG:::S::::V:YE::::::::T::::V::::G:S::::V:::

consensus       YFLKEADALERIRAAGGNDNVMDLIDRTDERDTPFLVVQLIVDGIELDDAIDRHGPIDDP
#oth            ..1..111..11.1...11....111111.1.1.1....11...1...11..11..1.11
rrnAC1159       ::K::VGS:::::R:::HE::::YY:QVT:::V:::::::::::::::EV::Q::::::S
Hmu0744         ::::::::::TV:::::::::::::E::::G:::V::::F-:::Y::::::::V::L:P:

consensus       EQVRRIGIDLCDAMGFLHENDIVYRDLKPDNIMLAGDDHPILIDFNTATGFDATDDPSAD
#oth            .1..11..1.....1.....1........1.1..11111.1...........1.111111
rrnAC1159       ::::Q:::::::::::::::E::::::::E:V::TP:IT:T:::::::::::::E:::SG
Hmu0744         :-:::V::G:::::S:::::::::::::::::::::Q:::::::::::::::G::---::

consensus       NAGTTILGPFKPREIAEASRADDRQGPWSDVYSIGKILLFLLKGSVPKKDGVNPRAFGAD
#oth            11.......1....1....11111....................1.......1.11..1.
rrnAC1159       :T::::::::::::V:::::T:V:::::::::::::::::::::::::::::::Q:::::
Hmu0744         D::::::::Y:::::::::D:E:G::::::::::::::::::::T:::::::D::D::V:

consensus       CDDYLAEIIARATQSDYRDRYRNATSLKEVLEARDPSPPAQASLEAIQANRQFTVEPGDT
#oth            .11.....11....11.....1...11.1...11..1..11..1111111.1...1....
rrnAC1159       ::::::::VE:::::H:::::::::V::::::R:::T:::T::VTY::::::::::::::
Hmu0744         :PT:::::::::::T::::::P::::M:Y::::K:::::P::::::LGED:S:::H::::

consensus       IGRDGAAGPPASITIDDADGEHISPIQVRFDIENDEAIWRLEDRSLNGTFVNKQAGWQRL
#oth            ...1.1111.1...11.111.11.111.1..1111.11.1.1.1.....1.1111....1
rrnAC1159       :::Q::S::::::::E:PQ::Y::SV::Q::::DG:--:S:H:::::::::Q:G:::::V
Hmu0744         :::::G:TT:-:::L::::-::V:::H::::TS::::::::::H:::::Y::T:T:::::

consensus       LQEGGRNRLRARGEDPTDRNGDDPPEEHALGDGDLIALVHPSYGTTFEFNPEQS
#oth            .111.111.111.1.....1.11..1111.1....11....1..1....11111
rrnAC1159       :S:P::::::SE:::::::H::V:::SVT:T::::VS::::T::V::::H::E:
Hmu0744         ::P::KEL:E:::G:::::::E:::S::::::::::::::::::::::::VS:T