2 genomes BUD3587 2 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC1244 - - Hmu1726 - - - -

Pairwise sequence scores
Consensus score	1891	rrnAC1244	Hmu1726
908	rrnAC1244	1354	381
1364	Hmu1726	381	1705

252 symbols
consensus       MTSPLSIPDSHDRGVSDLLAFTLTFSIIITGIALTGLGGLEAFDAIQDGAQANTAERSMI
#oth            111111111111111111111111.1....11111111.11.111.111.1111..1..1
rrnAC1244       ::::::::::::::::::::::::::::::::::VT::::G::::::Q::TTDV::T:::
Hmu1726         -----------------------V:T::::SVGF::VY:V::VED:S:S::::::::::T

consensus       GFARGTDAHRDNRAPRRTQRLELQGDRLQIADAEIRIEIGYEDDRSTNETIPTEAFIRRT
#oth            1..1111111111..1111111.1.11.11111111111111.111..1111111.1.1.
rrnAC1244       :::ET::D:IQGD:::::TSMK:::HG:S:RSSTLNVTV---:G::::--:S:G::::E:
Hmu1726         S::::VG:V::::::QHV:::::S:::::T::::::::::::::SY::::V:V:S:V:::

consensus       DSETRIIYTAGATFRSQQNGEVVSRKPALRCGPDSSSAHLSLLRINGQTDQSSDGRVTIR
#oth            ..1.111..1..11.1.11.1..111.11..11.111.11.11111..111..111..11
rrnAC1244       ::::D:V::S::VY:V::E:L::::::SF::T::::::Y::V:SLD::::F::SS::::E
Hmu1726         ::G::F:::::::::::P:::::TGT::::::S:T--::V::V:::::VS:::::P::V:

consensus       AAAQNRELISPLSPDKGVKNVSVNVRNTRHTDAWERLFESELPRWNGGNGRYTCDGIDRA
#oth            111..11111.1111111111111111111111111111111111111111111111111
rrnAC1244       T:V::KT:V::-------------------------------------------------
Hmu1726         :N:::::S:T::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       VVHNTTVGIAVN
#oth            111111111111
rrnAC1244       ------------
Hmu1726         ::::::::::::