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2 genomes BUD3655 3 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
- - -

Hbo1421

Hbo2797

Hmu1340

- - - -

Pairwise sequence scores
Consensus score3796 Hbo1421 Hbo2797 Hmu1340
1639Hbo1421 2927 954 717
2295Hbo2797 954 3996 1105
2251Hmu1340 717 1105 3762

575 symbols
consensus       ------VARADLRQRSRSSRLIALLALVAYLGKIVNT-------DQSLAGGA--NYRGRN
#oth            111111112112221211222222222121222212211111112222221211212122
Hbo1421         ::::::-------------------------------:::::::--------::------
Hbo2797         MRQIYH:::::FL::V::::::::::F:I:::YL:::GEIDLVFQ::V::::LN::::V:
Hmu1340         ::::::::L::::E::::TKFLVVPL::::FV:::TV::::::::ST:VV:T::D:T::P

consensus       NAAWIAAKAALIGSFFLVLFGFSLVKNSIGRDRETEVSELIAPMPISNGRYLLGKWLSNG
#oth            2211222222221222212211211121221122121111212222112211111111.2
Hbo1421         -------------------------------------------------------MFG:I
Hbo2797         :::::G:::G:T::::V:FV::Y:::::LY:::S::::::L:S:::::P:::::::::::
Hmu1340         TI::L:GMT:V::TTV::::::::::G:::::L::G:::::::SSL:::Q:::::::::V

consensus       AYLAFGPLVLGASAGVAHLFHGVGALNPIALLLPFLLIAIPAAAFIAAVALCFETIEPLR
#oth            11121222..12122122222111222.22121.22122112222222112221122112
Hbo1421         C:FL:M:V:::ST------------:T:VGDM::--------------------------
Hbo2797         :::GLIVS:::L::V:V:VV::::PT:::K::::VV:L:::T:F::GG:::LV::V:::N
Hmu1340         :V::::T:::L::T:::S::V::::FD:W::VS:::::T:::M:VV::::V:::::G:::

consensus       NTAGNIIYFLGALA------------AIVAGIA--APLDLMGYAAIYDAMADSILAQAPA
#oth            211.2221122212111111111111221211211221.12.1221122122.21112.2
Hbo1421         ---:QLPLWV----::::::::::::-------::KS::::::I:::TLT:S:L:::Q:V
Hbo2797         ::::::L::F:T::LMNVFYTGTVANGV:S::T::GYF:PF::TP::V::Y::V:SI::N
Hmu1340         G:::TV::::L::T:::::::::::::::::::PD:::::V:L:VVR:S:VQ::A::Y::

consensus       YAGGVPAFGFIYADR----AAFTWNGGAWPLWVYPQRLGVIAAGCCILGGATLAFDRFDD
#oth            12.11121.221222111122.1.2.11.1111111.11122112222222112.1.112
Hbo1421         ::::L:SV:TLE:T:::::-::Y:::::::::::::::::VLC:L::VLVS:VP:::LHE
Hbo2797         :T:::::::P::VEQ::::TI:::S::G:::::::::A:M:V::VSLTVFG::T:N:::P
Hmu1340         FD:S:--:::T:T:DPGGL:E:::D:I::TGPRLVA::P:L::A:GF::::W::::::::

consensus       SDRA------------------SGRLSSLLSRLEGDRENADDE-SEPPAIAD----VDLT
#oth            12221111111111111111111222211.1.1222122212112.111222111112.1
Hbo1421         T:P:EDSGWLLWASVPSVRNGL:SL::A:::::G:KQT:C:G:Q::R:::ES::::LS::
Hbo2797         :KTG:::::::::::::::::::::TT:::R::LPE:SSTESV:T::::PTE:::::T::
Hmu1340         :T:W::::::::::::::::::-----:F:::S:S:::T:::::V::STT::SSVD:::A

consensus       PVATRDGGGLHRILLAELRMALRGRPWWWYAGAALAVAAPAVA---------PQNPVRTL
#oth            ..21.11112212.11.1.111112.1...21.212121221211111111112221.12
Hbo1421         ::::::A::F::L:V::::L::::::::::G::I:L:GV:V:TLVTTGAANISVE::::F
Hbo2797         ::K::T:S::F::::G:F::T:SKL:::::L::VGII::SLIR::::::::::::--:GP
Hmu1340         ::-S::::SPVPV::::::::V::Y:R::::A:::::L:T:::::::::::::IGV::::

consensus       VLPIALIWPLIVWSAIGVRARRHRMEPLVFSSRRPIRQLGAEWASGV-IIAILVGSGAGA
#oth            121..111.1211.22.1.2211.221.1111221221.2.1121.1111121.112222
Hbo1421         :F:::A::::::::D::::PVQ::VL:::L:::Y:LK::I:::L::I::V::G::::VF:
Hbo2797         I:L::::::IF:L:SM::::Q:::::::I:::NSAYT::F:::IV::T:::V::::SI:L
Hmu1340         :V::::LL::SA:::L:T:E::Y:TTE:::VGS::::L:::TY:::::A:GL::SVP:PV

consensus       RAALTGHTGALLGFVAAVLLAPSLALAAGIWSGRSELFEIAYLTAWYVGPANGLQPVDFI
#oth            2221112111.1.21111.22.11.112.2.111121..22..12.11..2..1211112
Hbo1421         VYIA:::::::::::SG::::::::T:::S::RSTT:::LS:::L:::::L::A::::::
Hbo2797         T:L::S-:PV:::Y:::I:FV:::::SV:::::::::::VL::VI:F:::::::K::V:T
Hmu1340         :F::S:MD:::A:WL::::SL:AI:::L:V:T:::KS::::::::::L::V:::GAL:YV

consensus       AARAAAASAGIPIVYIALGAVLLGAALVRRRRQLG
#oth            11222221211121122.22112121112.21122
Hbo1421         G:TD:SVEM:::LAFVG:S:::V:T::L::TLE::
Hbo2797         :TE:T:L:TVSV::::C::LC:FV:SF:H:S::MV
Hmu1340         :::PST::::::V::L::TV:A::V:::G::::--