2 genomes BUD3741 2 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC0935 - - - Hut2959 - - -

Pairwise sequence scores
Consensus score	1682	rrnAC0935	Hut2959
815	rrnAC0935	889	624
1491	Hut2959	624	1680

226 symbols
consensus       VRTVAVIPAYNERETIESVVDGTSRHVEEVVVVDDGSTDGTPQLAREAGATVIEHVFNTG
#oth            111111111111111111111111111111111111111111111111111111111111
rrnAC0935       ------------------------------------------------------------
Hut2959         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       VGGAVRTGYRYAIRNDFDFVVQVDADGQHDPEEIPRLLSVAEDADMVIGSRYLNESIDDY
#oth            111111111111111111111111111111111111111111111...........111.
rrnAC0935       ---------------------------------------------:::::::::::::::
Hut2959         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::FQE:

consensus       PLIRRLGIRFFTAVVRKLGGIDITDVTSGFRVYRVSALQRILHRSDNHWAVEQTLDAARR
#oth            111.1...11..1..11...1.1............1..111.....1........1..1.
rrnAC0935       ::::::::T:::T::::::::::::::::::::::::::D::::::::::::::::::Q:
Hut2959         SWL:D::::S:::::NV:::V:V::::::::::::T::E:L:::::K::::::::E::::

consensus       DQRIREVSIAMPIRDEGESQFSLDTLALYPLRMTDAILRVLLFRES
#oth            111.1.......1.11.1...111.11........111......11
rrnAC0935       G:::E:::::::::::::::::::::V::::::::TVF::::::--
Hut2959         :LD:::::::::T:ET:S:::TVE:F::::::::::::::::::::