2 genomes BUD3760 2 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC2390 - - - Hut2409 - - -

Pairwise sequence scores
Consensus score	3989	rrnAC2390	Hut2409
2795	rrnAC2390	3948	325
1519	Hut2409	325	2665

508 symbols
consensus       MIRHSNTWVLNIIPENWDSCSSGPVDGDFHGNENVGDDWHGLDEFARNKENGLNRGDLVI
#oth            .111111111111.11111111111111111111..11.1111111.1111..1111111
rrnAC2390       :V:::::::F::S:::::::::::::::::::::::EP::::STS::::PD::::::::L
Hut2409         ::G------:YL::--------------------:::::--M:::R:TV::::D-----:

consensus       ARRAPGAGDDYERLRIWRFEKAQAIRDQGNIKRTAFRNAESDDILLCRPIQRELDEIYSE
#oth            1111111111.1111..11111.111111111111111111111.111111111111.1.
rrnAC2390       :::TS:S::P:GV:G::::H:::K::::S:V---PWKD:KYEYV:Y::::::::::::T:
Hut2409         DES::S:LQ::::V:::GT:SS::TQGG:G::::::::M:::::::----------F:::

consensus       PWDQVSFTTHNLQGAITSLQPEHRDDFFQELLDHAGTNEDARARLEQQLEGNADIGDFAR
#oth            111111111111111111111111111.11111111111111.111111.111.111111
rrnAC2390       ::::::::::::::::::::::::::Y:::::::::::::V::V:KS::::T::LT::F:
Hut2409         ------------------------GE::------------:S::V::KF:-:P:::EW:W

consensus       NEPESDWDLQQSSEQQDLDNIETPSIGQRFNQEAIEDLLNTGQNYRIQGINQRREDAGDR
#oth            11111.1111111111.111.11.11111111.11111111111.111.111111111.1
rrnAC2390       T:SHT:V::::::::S::L:::::::::::::::::QWF:::FG:Q:S:::P::TEE:::
Hut2409         :S:::::----TYTL::F:S:SV:-------K:EVW:::GYS::::L::LT:VS:::I:T

consensus       LLLLFNQEDEAYQDNIDDEQFEYIGEGMPDRGDQNTIEEGNSSLRDALDEAIPIFFFYKG
#oth            11111111111.1.1.111111111111111..111111.1.111.11111111111111
rrnAC2390       FV:::S:::GP:E:::G::E:::::::::EN:::::SSS:::V:I::V::::::::::::
Hut2409         ::TKY:SVE:::::L::GS:--------T::::EEV::::T::S::H:E-----------

consensus       TDDQEWEYRGLVDVIQWNLQQNGRAHREEIYFAMQMQTEEDDLDNDRNRELEGELYLIPV
#oth            1111111111111111.11111111111.1111111111111111.111111..111111
rrnAC2390       ::::::::::::::VE::W:T:PE:K::::V:S:::::::::::S:DKSS:S::::::::
Hut2409         --------------:::K:I:L::D:GY:V:V:----------K::::::F:::V-----

consensus       SDGWLPQLNNDCMNALSLEGFADAAQNIRDISADRIWGTTATESKLEDNHAEEMDEGDHI
#oth            111111111111111...1111111.1111111.1..111111111111.111.111111
rrnAC2390       :::::::F:QTV:S:::::LV::VP:SL:::::::::::::::::KKQK::::::T::::
Hut2409         -------:G:::V:S:::T::SE:::::IEY-V:V::--------:::::IVS:F:VEST

consensus       LFIHDGDLRGTDIVGAKFINRAIDEFIWANQDDEDIFRKQDFSIQRPSIQRVLEEADYDD
#oth            11111.1111.11.111111111111.1111111111111111111.1111.11111.11
rrnAC2390       ::Y::::FI::G:::ST::D:E:G::::D:P:SKY::TVE:::TET:::H::W::LG::G
Hut2409         TS:YS:I::M::F:-::VP:L:V:MY:V:S:E:::LV:::---::::TF:Q::TP:::S:

consensus       QRFVSGFQRVAEHRDENQNAEPIQRLFP
#oth            111..1.11.111111111.11111111
rrnAC2390       :PV::::::::S::L::LS::T:SK:--
Hut2409         V::::-:EK:R:KY:LV:::G:L::V::