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2 genomes BUD3917 2 proteins
a Hsa
Halobacterium
sp. NRC-1		 b Hma
Haloarcula
marismortui		 f Hvo
Haloferax
volcanii		 g Hbo
Halogeometricum
borinquense		 h Hmu
Halomicrobium
mukohataei		 i Hut
Halorhabdus
utahensis		 j Hla
Halorubrum
lacusprofundi		 q Nph
Natronomonas
pharaonis		 x Hwa
Haloquadratum
walsbyi
-

rrnAC3220

 - - - -

hla1605

 - -

Pairwise sequence scores
Consensus score1936 rrnAC3220 hla1605
1126rrnAC3220 1507 895
1705hla1605 895 1904 

254 symbols
consensus       MGRDRNQSDRAPDFDALDRRDYLQAAGALAAAGAAGLAGCSGRASETGTLATQVTDQPAD
#oth            11.111111111111111..1..1.1.11..1111.....1.1111............1.
rrnAC3220       -M::QQ::GT:S------:::::K:::G::::STV:::::::SG::::::::::::::G:
hla1605         :::K::VT::T:::::::::T::::T::-::L::::::::V:::--::::::::::::::

consensus       IADFASCVITIAGIWLRPEGAEDGADGNVTDDGNAADGDDADGNETDGGNQTDGNETDGD
#oth            .1..1.1.1.11...11.111.11.1111.111111.11..1111111111111111111
rrnAC3220       :G::E:::::M::::V::VSE::T:----:EESTT::TS::-------------------
hla1605         ::::::L:V::E::::G:::::S::::::::::::T::::::::::::::::::::::::

consensus       EDDSTEPAGREYHQFDEAQEADLVQLQNGNTALIDERELEVDTYRFLQLNVSNVDGTLAE
#oth            111111111...11...1.1.......1.1.1.1..1..1.1..11...1.11.......
rrnAC3220       ---------::::::::::K:::::::D:::::V::T:::::::EY:::D:TG:::::::
hla1605         ::::::::::::YE:::P:::::::::::E:Q:::::::S:G::::::::::::::::::

consensus       GGDAEVDRPGNAPLQFNAEFDIRANTRTVFTADFAPVRRGNTGRYILRPVASGIEIDYEE
#oth            ..1.1..1..1...1.11.111.11.........1..1..11.1.1.1..1..1.11.1.
rrnAC3220       ::::T::T::D:::::TQ:YE:::D:::::::::T::K::Q::E:::Q:::::T::E:K:
hla1605         ::E:::::::::::T::::::V:E:::::::::::::::::-:::L::::P::::V::::

consensus       TDGDGSDDSGNETE
#oth            11111111111111
rrnAC3220       --------------
hla1605         ::::::::::::::