2 genomes BUD3928 2 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC1996 - - - - hla1811 - -

Pairwise sequence scores
Consensus score	1679	rrnAC1996	hla1811
1215	rrnAC1996	1635	713
1177	hla1811	713	1682

222 symbols
consensus       MPTILSAALPAEDLALAESLEQLPNAQFEIERIVESCDDALMPLIWARAADREDIDQALE
#oth            .1.11.111.11111.111.111.111..1.11.1111111..11.111111.11111.1
rrnAC1996       ::::V:GTV::S::::NH::::::EL::::::::T:G::::::ML:V:GSQ::::E:T::
hla1811         :V:L::::::H:KFV:::T:SSV:::S::V:GV::T:ETSV::::::S:::H:HL:T::L

consensus       ADPSTDNVELLGDHADRWLFRMEWVNNVDLILQMLTNNQATILDAIGHDGAWILRLLFPR
#oth            1..1111....1.11.1..1..1..11.111111.1111....1.111111.11.111.1
rrnAC1996       ::::V::::::::FE:E::::::::DH::::V:::::SE::::::V::GT::K::V:Y::
hla1811         D::T:EE::::S:::::::Y::K:::::QSL:ET:VT::::::T::TS::R::V::M::T

consensus       RDGFSETHAHCAEHNIALEMISIRELNDDPAGRYGLTGAQFEALAEASDRGFFEVPREVD
#oth            1111.1.111.1..1111.11..1.1111........1..1.1..1.111.111.....1
rrnAC1996       :SL::K::DF:::::L:F:VS:::::DE:::::::::S::Y:I::::::::Y::::::::
hla1811         H::V:::M:::K::D:D::::::C:M::Q::::::::::::::::T:WEQ::YT:::::E

consensus       LADIAAALGISHQAASERLRRAIDALIQDTLMVDDDPAELIR
#oth            .111.11...1...1......11...11.1.1..11111111
rrnAC1996       ::EL:D::::T:::::::::::T:::VE:V:F::F:------
hla1811         :V::::D:::::::L::::::G:::::::::::::E::::::