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2 genomes BUD3930 2 proteins
a Hsa
Halobacterium
sp. NRC-1		 b Hma
Haloarcula
marismortui		 f Hvo
Haloferax
volcanii		 g Hbo
Halogeometricum
borinquense		 h Hmu
Halomicrobium
mukohataei		 i Hut
Halorhabdus
utahensis		 j Hla
Halorubrum
lacusprofundi		 q Nph
Natronomonas
pharaonis		 x Hwa
Haloquadratum
walsbyi
-

rrnAC2320

 - - - -

hla1664

 - -

Pairwise sequence scores
Consensus score2275 rrnAC2320 hla1664
2069rrnAC2320 2274 242
448hla1664 242 618 

287 symbols
consensus       MANESNIYNLDWLGFDWSPWLSLDPDSEELAALSTDAGLYRVRHETYGGLIYIGETGRSL
#oth            .111111111111111111111111111111111111111111111111111111111..
rrnAC2320       :V:::G::::::::::::::::::::::::::::::::::::::::::::::::::::::
hla1664         ::TKT:----------------------------------------------------::

consensus       RGRIRAIIRGVFDDELPFSDPHTASPSLWAIADRHGSGFEVSGTTPPEAEDKQQRKAIDD
#oth            1..11111111111.1.111111111111111111111111111111111111111.11.
rrnAC2320       :::::SL::::::::M::::::::::::::::::::::::::::::::::::::::::E:
hla1664         V::LT::-------:::---------------------------------------:V::

consensus       ALIALHRRETETNLIGNFGRMPPGYSKSKKRSSGVRGGHSDADGLRNHLRGIDPLPWSNP
#oth            111111111111111111111111111111111111111111.1.111..1111111111
rrnAC2320       :::::::::::::::::::::::::::::::::::::::::D:T::SF::::::::::::
hla1664         V----------------------------------------::::E::::TVESV-----

consensus       TGITDQDWMGLSWSSPRPLSESAGNVPVDGGLYRIWNPDNVPPLEYIGESVTLSDRLNRH
#oth            11111111111111111111111111111111111111111111111111111111..11
rrnAC2320       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
hla1664         ------------------------------------------------------EK::--

consensus       RRNRDEELYISYAIRNDGDAKHQREQAESDLIGAHWLACRAAPRDQF
#oth            1111111.11..11111111.1111.1.11.1.....1111..1..1
rrnAC2320       :::::KG::F::VT:PEFEE:F:LS::::E:L::::::::K:::::Y
hla1664         -----:::V:::::V:::::::K:::I:T::::::::VTE:::W:::