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2 genomes BUD3980 3 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
- - -

Hbo3043

Hbo3625

- -

hla1073

- -

Pairwise sequence scores
Consensus score2829 hla1073 Hbo3043 Hbo3625
1741hla1073 3095 1298 1228
2231Hbo3043 1298 4448 1721
2075Hbo3625 1228 1721 2652

641 symbols
consensus       ----MTRKAFSRRSVLRTIGIGIAGGGLA----GTGSADETADNSRHV-VGTKSRYGVDA
#oth            11111122222..111111.1.11221111111.111.211211112.11.11.21.112
hla1073         ::::::EP:YT::G::::::S:S:V:S::TLGT:::A:TR:::ETVT:N::YA:ES:RS:
Hbo3043         MKTGQ:PTE:::::L:K:V:::::ST:FI:::::::::Q::S:::::::::::::::::V
Hbo3625         :::::G::KVY::::I:G:::::L:S::::::::QA::::-GG:::L::L::::Q::::I

consensus       ARARANAVDHEIDFGERGNALVGDFPDEALAALAARREIRYVERDRAVQAL---------
#oth            .221.21112.11.12212.1111111122221212212....1.221221111111111
hla1073         :LS::S:::::FG:----D::TAQM:ESETD::::Q:::::::E:::LGGIVTPRRQPRR
Hbo3043         :GQ::D:::K:::::K::K:V::::S:::::E:ES:DDV::::::VT::T::::::::::
Hbo3625         :::Q::TIET::::::S:::::::::::LVEKFR:EG:L::::::IE:H:::::::::::

consensus       ---GQSLPWGCARVAADAAARAGYTGSGANVAVLDTGIDSTHPDLARNLGEGYAVV----
#oth            111..12.1.12212..21222.11.1..2..1.....1.1....2211.1.1.1.1111
hla1073         QVD::RV:Y:V:VTG::V::EH::::::::::::::::::::::::T:R:R:A:F:PSVS
Hbo3043         :::::::::::TK:E::TTI:::E::T::D::::::::E::::::T:T::::::::::::
Hbo3625         ::::::M::::V:::::::HQR::D::::H::I:::::::E::::SQ:::::::::::::

consensus       DSDRGDEPWNDDH----NHGTHCAGIAGAVNNDQGIVGVSPAATLHAVKVLNGD-GGGSA
#oth            .111112.111.111112....1..221.11.11.11..1121...11.1.2.11.1.11
hla1073         :IEEF:F:AGQ:DDILVS::::V::VV::ND::T:::::::::::::::::I:VL:::::
Hbo3043         :::::E:::::::::::T:::::::TI:::::G::V:::A:GV::::I:A::::::S:TG
Hbo3625         ::::::V::::::::::::::::::::N::::::::L:::TR::::S::::S::::::::

consensus       AGIAEGIRWAADQGHDVASMSLGATSRSSVIADAVAYAYERGVLLVAAAGNEG------P
#oth            211.1.1211....2..211.1.1.1211112...21..11.1...1....1.111111.
hla1073         ::::A:VEFV::::W:::NL:::E:G:VD:L:::::D::::::::::::::D:LLENDP:
Hbo3043         GD::::::::::::Y::L:::I::::P::::E:::K:::DK:::::::::::::::::::
Hbo3625         S:V::::K:::::::::I::::::::G::I:K:::E::::::S:::G:::::::::::::

consensus       CSD---CVHYPAAYDEVIAVGSTNRNDELSEFSSTGPEVEIAAPGTDIRSTVIG------
#oth            11.111111..1.121.1..111222.1.11...1.1..111...1112..112111111
hla1073         A::GESA:S::::FE::::::A:D:::D:AA:::V:::::L::::::VL::ALPINIYSN
Hbo3043         :D:::::I:::::::D:V::S::TID:::::::::::::D:::::S::T:::::::::::
Hbo3625         :::::::::::G::P:::::::V:DE::::::::::S::::V::::E::::::-::::::

consensus       -----GGYRALSGTSMATPHVAGAGAILMSN-GASNEEARKRLTETAEDIGLRQNEQGAG
#oth            1111111.222....1.1...1.11.2..121.2..2...1..1.1.1121122212121
hla1073         VEEPFNR:IE:::::F:A::::::::L:::DV:L::V:::E::R:::A:V:::ED:::Y:
Hbo3043         ::::::::::F::::::::::S:V::V::A::::::T:::::::::::::::D:::M:::
Hbo3625         ::::::::QVY:::::::::::::A:::::T::I:::::::::::A::------------

consensus       RLDAAAAIGGD-------------------------------------------------
#oth            111221122221111111111111111111111111111111111111111111111111
hla1073         :::V:::L:VE:::::::::::::::::::::::::::::::::::::::::::::::::
Hbo3043         ::::K:::L::SDGGDGGSNAFEVVTTNASDVSQTSATLGGDLTGLGDYSSATVGVEYWV
Hbo3625         -----------:::::::::::::::::::::::::::::::::::::::::::::::::

consensus       ------------------------------------------------------------
#oth            111111111111111111111111111111111111111111111111111111111111
hla1073         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
Hbo3043         DGAEHDSATTVEVGSESSAGTFTTTVEELEADTDYQFRAYATADDDTVTGSAVAFSTSEP
Hbo3625         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       ------------------------------------------------------------
#oth            111111111111111111111111111111111111111111111111111111111111
hla1073         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
Hbo3043         AEAPVVKTLSPTDIEHEEAELRGEVVSLGDADEVTPGFICWEKGDRDDAEYIEDFDTDEP
Hbo3625         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       -----------------------------------------
#oth            11111111111111111111111111111111111111111
hla1073         :::::::::::::::::::::::::::::::::::::::::
Hbo3043         EEFDEDIEDLDDGETYVAVATVTTPDGHRIEGNRITFVTAE
Hbo3625         :::::::::::::::::::::::::::::::::::::::::