2 genomes BUD3997 2 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - - - Hbo3789 - - hla1344 - -

Pairwise sequence scores
Consensus score	6339	Hbo3789	hla1344
3239	Hbo3789	4113	2274
5374	hla1344	2274	6278

858 symbols
consensus       MRMASGSQGRPINLAHVRIQQKSPATGNRPTVFGGLISDRVTMVEHTRTLDFKIAFAIGL
#oth            111111111111111111111111111111111111111111111111111111111111
Hbo3789         ------------------------------------------------------------
hla1344         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       GTMIAAGIFSLSGTAVAEIGSSAVIAFVLAAIVASLTAASYSEFASIYSENGGGYLFSSR
#oth            111111111111111111111111111111111111111111111111111111111111
Hbo3789         ------------------------------------------------------------
hla1344         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       TFEHDTLVYVVGAMLFLGYTGTTAFYLATMDEWVVRFILPESLHVLPHGSSGVLAALLLG
#oth            111111111111111111111111111111111111111111111111111111111111
Hbo3789         ------------------------------------------------------------
hla1344         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       VLNARGTEESGTFQLFVTGAKVAVLLAFIGGAVAFRGPAVAAGNFAAGFTGDPVGIVSIA
#oth            111111111111111111111111111111111111111111111111111111111111
Hbo3789         ------------------------------------------------------------
hla1344         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       ALAFITFFGFSAIAASAGEIIEPRRTVPLAIAASIITVTILYAFVIVAMVNAPVPAEVIA
#oth            11111111111111111111111111111111...1...1..1....1...1...11.1.
Hbo3789         --------------------------------:::::::V::T::::::::::::RS:L:
hla1344         :::::::::::::::::::::::::::::::::::L:::::::::::S:::S::::::::

consensus       EEGETAMGRVAAGFLGPAGRLLIVAGAIFSMVSASNASILAASGIGSLMGRQGQAPRRFA
#oth            .1......1...1...11.11......1......................1..11..1.1
Hbo3789         :-::::::T:::S:::SW:Q:::::::V::::::::::::::::::::::Q::HG:::::
hla1344         ::::::::::::::::::::S::::::::::::::::::::::::::::::::::::P:S

consensus       RIHRQYRTPFWSIAMATATIVALIFVFIGLFPAQGGVIPFDLTVALPALGLIGIHALGLE
#oth            11.11.1.....111..11..1..1...1..111111111111111111.111111...1
Hbo3789         YL:PE::::::::T:::::::G::::::T::SE:---------------::T::::::::
hla1344         ::::::G:::::V:S::GV:::::V::::::::E::::::::::::::::P:TFTN:::T

consensus       PLTGFATLNLLLPLAVVNGALIYSRRRHPDIERGFRMPGVPLLPIIGIIANLALITNLPP
#oth            1......1...1..1...11......11..1.....1.1...1.11.11..1.......1
Hbo3789         :::::::F:::V:::::::T::::::N:::L:::::::L:::::VV::L:::::::::::
hla1344         T:::::::::::::S:::I::::::::Y::::::::V:::::V::::V:::V:::::::V

consensus       KGVAVGVCLIVGLGAAYIAWGGAPDIDELIEEVVPPHLPAGQPEAERAVAEADGTEADLA
#oth            1..1...111.1111..11...1.111..1.....111111111.111.11111.11.11
Hbo3789         V::::::GFV:V::I:::::::::H:E::::::::::::T:V:T:VGP:GSTE:::P::G
hla1344         :::V::::::::ML:::LI:::K::M:::Y:::::STTS:S:V::::::::::T:V::V:

consensus       ETDVTADASGGTAETPGEDRFRILVPVARPDRAVRYARLAAALARAQDREPLVDVLNVTQ
#oth            111111111111111111.1.1...1........1.1...111.11.111.1.1..1..1
Hbo3789         ------------------:::T:::S::::::::S:V:::TE:::::::K:::K:::::H
hla1344         :::::::::::::::::::S::::::::::::::::::::::M:EY:EG::F::::T:::

consensus       IPDQTPNEAVRDIARGRAGRIQELLAAADIDVEYAVEGHICRDIAFDIVQTARNGQSNRI
#oth            ..1...1.1.111111.111.1....11.11.1.1....1...11........1111111
Hbo3789         ::::::::M:::T:EK:::D:K::::E:::G:::S:::::::::::::::::::::VD::
hla1344         ::E:::Y:::EE:T:::IT::::::::E:L::S::::::T:::VG::::::::DKE::LV

consensus       LMGYPEEHQEIAEHVEYKAPCGVLFASNVDAIDALDTINIGAGGGPHHLALLPLINRLGQ
#oth            .......111...1...1.....1.1.1.11111.111..........11..1.1111.1
Hbo3789         :::::::S:S:::T:::S:::::F:T::::::GE:T::::::::::::::::::V:K:::
hla1344         ::::::::T::::::::::::::::::G:LDP::::VV::::::::::MD::S::D:M:E

consensus       RDAEIHVINIDPEGGEGRKENTDATMAALPAAESVQIHNLTADTIADGLVDAARENGGIL
#oth            111.....1.1.11.1.11.1111.111.1111..11..1..1.1.1...11.11...1.
Hbo3789         HGD:::::S:::LS:-:L::PV:E:::::S:V:::HV:::::::V:E:::S::VG:::L:
hla1344         ::::::::::T:::::::P:::E::VSG::N:S::::::T::Q::::::::R::::::::

consensus       IIGATRDRRLRRRVFGSTPDRVIDLAREANVPVIIYASPRGVQRHIEDYLYPIYRYLHRH
#oth            ......1.....1.......1..1..1111...11.1.11..111..1.1.......111
Hbo3789         ::::::::::::W:::::::::::::::::::::::::SS::T:::::::::::::::::
hla1344         ::::::T:::::::::::::N::K::QGSG:::LV:S::::::GP::E:V:::::::WG-

consensus       LARRRPFRRFARQPEKQE
#oth            111.1.11111111.111
Hbo3789         ::E:::::::I:T:::TS
hla1344         -I::S:TQ--:G:S:T::