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2 genomes BUD4054 4 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC0647

- - - - -

NP0174A

NP3424A

NP4238A

-

Pairwise sequence scores
Consensus score3552 NP3424A NP4238A rrnAC0647 NP0174A
2604NP3424A 3474 3031 820 901
2617NP4238A 3031 3492 815 917
1675rrnAC0647 820 815 3409 1912
1743NP0174A 901 917 1912 3388

479 symbols
consensus       -----MDDNTGRASRRRLLKAAAAAAGAAALAGCALLL-DGEEAAGGEEQLEGIPDEPIR
#oth            11111232123332..22.1111121111.1...12.111112322112222211...12
NP3424A         ::::::T::RI:S:::::::G::::G:IG:F::::::-:---:E::E::::D::::::F:
NP4238A         ::::::S:::TH:::::F::G::::G:IG:F::::::-:---DD::::::V:::::::F:
rrnAC0647       MQQTTT:HD::GIG::Q::S:VGGS:V:::::::ST::S:::T:DQ::QSGGE:S::::Q
NP0174A         :::::-MTDSFNLD::NV::::GGT:V:::::::SV:::::::NGN:GAA::DV:::::E

consensus       AGHFTFESGAPAFLGDQAINGADMAVDRINDAGGILGEREIELDDRIDEDAGVESMRGFV
#oth            1112..22.1.211.321222122112...11..12.2.11.211221122221111211
NP3424A         IV:::::::P:::Y::EM::AV::M::::::R::L:::::::IV::::::::::::::S:
NP4238A         IV:::::::P:::Y:EPM::VV::M::::::R::L:::::::VV::::::V:::::::S:
rrnAC0647       ::LL::TR:::GV::I::QR::EL::Q:::E::::G:Q::::::VVNEGSNPLD:YNQ:I
NP0174A         ::LQ::RE:::SV::L::EY::QT:IR::::::::A:-:QM:::VIEE:G:TI:NY:R::

consensus       RQIAQNDEADMLMGLISSANHLSIAPAAEENQIPNVVTDGGTTQLFEEN-PDLEYSFRFA
#oth            1111121111111.11..1322221.22.11112122.211111.1.122..22.21.21
NP3424A         ::::::::::::::::::::A::VV:::::::::FL::VP::Y::::::::::::AV:T:
NP4238A         :::::::::::::::V:::HS:::::::::::::FI::AP::Y::::::::::D:VV:P:
rrnAC0647       -----EEGKEVTF:P:::GT:SQ:::EI:K:G:I::S:::TV:T:Y::TV::PT:::::Q
NP0174A         -----DEGK:VTF:P:::GG:EELV:VV::EGVV::G:::TV:T:Y:TEY::V::::::Q

consensus       NHNAAEAVGGAR-AVEQMGADNIETVATINPDYAFGHDERDMFTAAIERIRPDAEVLETR
#oth            1312111222..22..12111112.1121111.21.2.1121.22111111111.21121
NP3424A         GT:::G:I:::::I::::--:DV:::V:VDQ:::W:::H::::VE:L::::::I::::::
NP4238A         GS:::G:::::::L::::--:DV:::V::D::::W:::H::::::::::::::I::::::
rrnAC0647       :YDIM:V:TM::E:::RI:::::S:::GV::G:S::E::MRV::Q::Q:L-T:::IVYEG
NP0174A         ::DVM::LSA::T::::L::E::D:F:N:::::T::Y:::EV:N:G::QL-TG::EVYDG

consensus       TPELGASDMSAHITAIQDLEPDVLFSSLWGGDISTFTSQAVAGGLFDDIGTTVF-GDTGA
#oth            2..1111.112.1211212...1211.1....211122.121221.12221212211111
NP3424A         :::PFI::Y::::S:V:::::::V:::::::::::::::::DD::::::::G::V:::::
NP4238A         :::PFI::Y:::VN::::::::L:A::::::::::::::::D:::::::::ALLY:::::
rrnAC0647       F::::::::AN:::S:NNE::::T::::::::VT::VR::N:NNM:EN--:::::----G
NP0174A         Y:::::D:::T:V::VA:A::::::T:C::::ATLLLD:GQ::D:::AVDI::-:----G

consensus       PLLYSAADDMPENVIMG--I-SGSRN-YWG-PGRGGWQPN-ELFRYETQDDHRTFPDAHF
#oth            12.21112.2112222.121211111211121221211.121112212231132211111
NP3424A         :::RALG::::::::::::-:-----:---:-::::Y::::--Y::::AE::QE:V:DY:
NP4238A         :::D:LG::::::::::::-:-----:---:-::::Y::::--Y:::ISS:::A:V:DY:
rrnAC0647       TT:::::G:V:GDALA:TD:Y:::::Y:::K:AL:N:::GR:::DAA::QEGV:V:T::Y
NP0174A         :V:::::N:FS:ELVE::N:W:::::F:::S:PQNQ:D:GV:::E-:A::E:D:I:T:::

consensus       DRY--MPGWGAYHAWATF-ALEAAVEQAVDLTGNWPTQSQIAASIRGHGFETPAGSHVIA
#oth            11122.1.1..112.121211111.11.1222.21.112.113211111.2121.1.211
NP3424A         :::GD::::::::D:VA:Q::::G:::::Q:::::::G::LMS::::LS:::TH::::M:
NP4238A         :::DE::::::::E::S:K::::G:Q:::EV::::::G::LMN::::LS::MSH::::M:
rrnAC0647       ---:::S:Y::VT::::-:----:::K:I::L:TY:::E:::QVLE::::F::::Y:N::
NP0174A         ---:::S:Y::VT::::-:----:::K:::IV:G::S:D::::TLEN:::Y::::Y:T:G

consensus       QAGDRQASAPAVFGQMTPDDD-PVDHHLLEDYEFIPAHECNPPDGVDTFDWVEQIDPV-
#oth            21111.1212221.1112.112121222.1112111.2122..3.23221.21113212
NP3424A         :::G::::::G::::P:::H:F:::::::T:::::::::::::E:M:::E:::::E::E
NP4238A         :::G:::::::::::P:::H:H:::::::T::::::::::::::::M:::::::::::Q
rrnAC0647       E--:H:GASNSFA:::VY::::-LGAAR:::VNTYA:T:TA::P::TGS::LDSWSA-:
NP0174A         P--:H:GYST:H::E::W::G:-M:MPV::NVTT:::SHVS::Q:EISI::I:SW---: