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2 genomes BUD4057 3 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
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rrnAC0642

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NP0168A

NP3430A

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Pairwise sequence scores
Consensus score1850 NP3430A rrnAC0642 NP0168A
1047NP3430A 1861 786 804
1489rrnAC0642 786 1847 1255
1503NP0168A 804 1255 1907

264 symbols
consensus       -----MLEARNLRKEFGNLVATDDISLEFGTEEGELVFIVGPNGAGKTTFINLLTGLLEP
#oth            111111..11112.1..2.1.1.111.1.11121.2.1.1.........1...11.2.21
NP3430A         MSSTPI::TVDV:::::::::V:G:::::Y:D--:T:G:I:::::::::::::IS:V:PL
rrnAC0642       ::::::::::::Q:S::E:::::::T::::K:::::::::::::::::::::::::F:S:
NP0168A         ::::::::::::V::::K:R::::V::Q::::S::M:::::::::::::L::::::::::

consensus       DEGSIVL-----DGD---DITDMRANRRVRAGLVRSFQIVQIFEEMTVRENIRTAALSRQ
#oth            11.1112111111.11111.1212222..22.11....112211.1.1...21122.122
NP3430A         TD:Q:LF:::::A:::::::S:LKRYK:::R::::::::P::YD:L:L::::QSSI:::K
rrnAC0642       ::::::::::::::::::E::G:S::G::D::IA::::V:KV:::::::::L::VV:TE:
NP0168A         ::::V:MHEQTD::TVER:::E::PD:::KE:::::::::HL:::::::::V::::::NH

consensus       DKNNRLFSLADRHEEVEADVNELLEQFRLEDAADEVAEELPHGDRKLLDVAMSFALDPNY
#oth            2122211122.21.11112111.1.2.1.112..111.2....1..1....1..1.1.21
NP3430A         QE:::::TPT::E::SLQEA:::I:T:N::AH:::HT:H::::V::V:::::::::E:QI
rrnAC0642       G:TWS:::M::G::::::Q::::::K:::G::::T:::::::::::::::::::G:::D:
NP0168A         ::FTKVR::D:E::A:::::DA:::::::::V::::::T::::::::::::I::::::::

consensus       LLLDEPTSGVGAREKEYVIETIVEAAREQNVGTVTIEHDMDIVREYADRMVALHEGAVHR
#oth            11........122..11.1..111122111121.1.....11111.11.2...11.2.22
NP3430A         MF:::::::::SK::ND:M:::TQ::D:::I:L:F:::::ELI:::SS:T::::::R:LL
rrnAC0642       ::::::::::ST::::::::::::VG:AEG:T:::::::::::T:::::V::::Q::::G
NP0168A         ::::::::::::E::::::::V:::SK::::S::::::::::::T::::::::V::E:F:

consensus       DGPPTALDTDDELRRLLLGVGEDE
#oth            211.1212111111221.111111
NP3430A         :DE:D:VFNSE:VNEFI:EG:V--
rrnAC0642       V::::M:E::::::::::::::::
NP0168A         E::::L:::::D::QT::::S:::