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2 genomes BUD4076 2 proteins
a Hsa
Halobacterium
sp. NRC-1		 b Hma
Haloarcula
marismortui		 f Hvo
Haloferax
volcanii		 g Hbo
Halogeometricum
borinquense		 h Hmu
Halomicrobium
mukohataei		 i Hut
Halorhabdus
utahensis		 j Hla
Halorubrum
lacusprofundi		 q Nph
Natronomonas
pharaonis		 x Hwa
Haloquadratum
walsbyi
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rrnAC1404

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NP3436A

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Pairwise sequence scores
Consensus score1050 rrnAC1404 NP3436A
750rrnAC1404 1002 451
751NP3436A 451 1030 

140 symbols
consensus       MYRILMPVDADEDRARGQAAFVAELPGADTDIEAIILHALQDDDAEAPEGFGEIRNAERI
#oth            ..11.1...1..1.111..11.11..111.11..1.111111111.1..111111111.1
rrnAC1404       ::T::V::::::::::::::::::::S:E:E:::V:T:::TKEE:::::---::::V:::
NP3436A         :::V:::::T::E:SLK::EY:SS:::S:::V:::::FIF::::E:L:::::SFKS:T:V

consensus       GSVRRVRDHLDDHNVAYQLADDAQEPADRIIEEANEHDADQIVLGGRKRSPTGKALFGSV
#oth            11..1.111111.1.11111111111..1.1.1.1.1.1.1..1.1..1..1...1....
rrnAC1404       ST::L:::Y:K::::DV:::EGQ:P:::G:V:L:D:F::::::M:S:::::::::V::::
NP3436A         ::::::SE:F:E:D:::TVL:::G:T::::::::::::V:S:::::::Q::V::::::::

consensus       SQQVILDADRPVTVTGAREE
#oth            1.1.1.11.1..1.1.1111
rrnAC1404       ::::L:E::D::::V:S:::
NP3436A         T:S::::S::::V::::DK-