2 genomes BUD4077 2 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC2318 - - - - - NP3888A -

Pairwise sequence scores
Consensus score	5220	rrnAC2318	NP3888A
4415	rrnAC2318	5215	3403
4208	NP3888A	3403	5102

683 symbols
consensus       MPQNQELIEELIQFFRDYYPDEIAQLAQRFPRDQKSLHVDFDDLYRFDPDIADDLRNQPE
#oth            .1111.11...1.......11..1...1.1..1....1..1..1.....11...1.11.1
rrnAC2318       ::::H::V:::::::::::SE::::::::Y::E:::::::Y::::::::G::::V::H:K
NP3888A         :SIM::T::::V:::::::::::G:::M:::::::::Y:::::V::::::L:::::E:::

consensus       RLQEALEEALRHYDLPVAVDINDAHVRIYNLPEIHTLDPEQVSRHENIGQLLDIRGQVQK
#oth            111.11....11.....1.1111.........11111.111....1...1..........
rrnAC2318       E:::H::::::L:::::::EL::::::::::::::VF::SG:::::::::::::::::::
NP3888A         :ML::F::::S::::::D:::GG:::::::::T--:::V::::::S:::T::::::::::

consensus       VSAVKPRIQEAVFECQRCGTRTEIPQHGDQLQEPHECQGCERQGPFSLAAKASDWIDHQY
#oth            ..1....111..1.....1.1.....1.11.......1........1.1111.1.1....
rrnAC2318       ::D::::LT:::W:::::::Q::::::::S::::::::::::::::::D:S::S::::::
NP3888A         :::::::::T::::::::S:::::::T:E::::::::S::::::::V::E:S:::V::::

consensus       ARIQQPPERTNGGEAQSIDAHLEDDLIREFDAGDRITLTGMLDIEEPDANQGRAFDTNLD
#oth            ........1.1...1111.1.......11.1....11...1....1.111.111...11.
rrnAC2318       ::::::::K::::::::V:::::::::EG::::::VV:::V::::::G:D::LD::::::
NP3888A         ::::::::::K:::GET::V::::::::::E::::::::::::::T::R::S:::::TV:

consensus       ARAVIREESDYDDIDVEEHRDEIEAIANGERGDPYQLLIDSINPEHRGDEDIKLAIALQL
#oth            .11.11.....1.1..1111...1...1..1....1........1.1...11...1...1
rrnAC2318       ::S:VK:::::::V:::::L::::::::::::::::::::::::K:::::HV:::V::::
NP3888A         :Q:::::::::E::::KTY::::T:::S::E::::E::::::::::K::::::::::::M

consensus       FGGWAREYPDGGRDRGDCHILLLGDPGCGKSTFLRAVDDIAPRSTYASGKGATAAGITAA
#oth            ....111111.1.1...1.1..............11..11................1...
rrnAC2318       :::::H:::::S:::::::M:::::::::::::::Y::Q:::::::::::::::::M:::
NP3888A         ::::S:----:::V:::S::::::::::::::::Q::::L::::::::::::::::::::

consensus       AVADDFGDSEWGLEAGALVLADGGIACLDEIDKMQKDAVSSMHDALESQRVRVNKAGINA
#oth            ..1....11..................1.....1111............1.1........
rrnAC2318       ::S:::::T::::::::::::::::::V:::::::S:::::::::::::Q:H::::::::
NP3888A         :::::::E:::::::::::::::::::::::::VP:K:::::::::::::::::::::::

consensus       TLNARTALLAAGNPKDGRFDRYRPRAQQIDLGPTLLSRFDLMFMVSDEPDRDDDADVVEH
#oth            ...1..1.......11....1.1.111...1....1...........1..111.11....
rrnAC2318       ::::::S:::::::::::::::::KGE:::M::::::::::::::::::::E::::::::
NP3888A         :::S::::::::::SE::::P:Q::::::::::::M:::::::::::S::V:S:RE::::

consensus       MIRSRRAAARQERGENLSEEEQRRIEPAIDRRILRAYIAHAKNECHPIIEQGNEEAADRL
#oth            .11..1..11111..1.1.1..111....11111.....1..1111.1111111.1111.
rrnAC2318       :LQ::Q::G:HT::::::::::K:V::::::SVM::::::::QI::::::--D::V:E::
NP3888A         :::::::::K::L::E:T:K:::S:::::PK::::::::Y::::VT:YLP:::S::R:Y:

consensus       QQEFLELRAGANEDDDDSPIPVTFRQEEAIQRLAEASARVRLDDEVEIEDIDRAIGLVRK
#oth            1.1.111.11.1.1.11..1.....11...1....1......1.1.111.11..11..1.
rrnAC2318       K:F:V:F::::G:Q:::::::::::KV::::::::S::::::S:T::::::E:::K::T:
NP3888A         :::::K::L-:::::ES::V::::::::::E:::::::::::::::TKG:V:::L:::::

consensus       SMRQVGIDPESGEFDADIIETGQSENQRERRERILAIIERLDGATVEEIADIIDEEEERL
#oth            ..1...1...1......11..11.11..1..1.1111..111.1..1.11111111.111
rrnAC2318       ::::::Y:::::::::::::::L:::::::::::VTV:::::::::G::D:KVKF:::I:
NP3888A         ::E:::::::T::::::VV::S::KS::T::K:V:::::DKQ:T::::V:E::::T:K:V

consensus       RNDVQQLKNAGRIYALNDEFRRT
#oth            11..11..11.11.1111.1.1.
rrnAC2318       QY::E:::E::::::V:::::::
NP3888A         :::::S:::R:QV:E:DG:V:P: