2 genomes BUD4078 2 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC1989 - - - - - NP1466A -

Pairwise sequence scores
Consensus score	2123	rrnAC1989	NP1466A
1668	rrnAC1989	2115	1302
1757	NP1466A	1302	2133

297 symbols
consensus       MAIEDIAGLIVDAALISAVYALIAIGFTMIFGVGGVLNLAHGALIMAGAYAYLSLTSDSI
#oth            111111.111.11.1..............1............1...1...1..111.1.1
rrnAC1989       -MLG:::SV:::G::::::::::::::::V::::::::::::::::::::T::::V::::
NP1466A         ::::TF:::F:T::M:::::::::::::::::::::::::::G:::I::::::VV::T:T

consensus       LASITIHPIAALPLAIVVAALASFALYKGLVRFIEDNVIITFLATIVVAIALAELMELIF
#oth            11.1111.1111111...11.1.11..11..11..11.1......1...1111..11.1.
rrnAC1989       :::V:L:::V:F::T:::VG:I:YG::VV:::T::E::V::::::::::::FT::VT:V:
NP1466A         VP::V:P:V:G:VV:::::::::::::::::E::::D::::::::V:::VI:::::::::

consensus       HANPRQLSPFVPGSLALQAIGTRIQHIEIAAFVLSWVAIGALWYYVTKTDAGRSIRATSM
#oth            1.1.111111...11111.1.1..111.1.1..1....1.1.........1....1....
rrnAC1989       ::Q:Y:Y:-V:::V:QV::L::::LYV:L::::V::::M:L:::::::::S:::::::::
NP1466A         S::::S:T::::::T::P:::V::::::::G::::::::::::::::::::::::L::::

consensus       SQRGAKLTGVDIAAVRARTWLIAGGLAGIAGVFLGGIQAAEPLMWLDPLALAFIIVVIGG
#oth            11...1.....111.1.....1......1......111111.1...1..........1..
rrnAC1989       :E:::M:::::VSG:::::::V:::::::::::::::G::::T:::E::::::::::V::
NP1466A         T::::::::::::::S::::::::::::L::::::TL:QTS:::::::::::::::::::

consensus       IGSIKGSLAAAYIIGFLQTATGQLLGQEFRGIMALIILAAVILIRPQGLYGREFVDE
#oth            .......11...11.1.1.1.111..111..111.11111.1.11.1....1...1.
rrnAC1989       :::::::V:::::V:Y:::::::F:::SV::::S:VV:VV:L:VL::::::T:::H:
NP1466A         ::::::::V:::F::::E:Y:VG:::P::::VF::::V::::::::E::::::::::