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2 genomes BUD4087 2 proteins
a Hsa
Halobacterium
sp. NRC-1		 b Hma
Haloarcula
marismortui		 f Hvo
Haloferax
volcanii		 g Hbo
Halogeometricum
borinquense		 h Hmu
Halomicrobium
mukohataei		 i Hut
Halorhabdus
utahensis		 j Hla
Halorubrum
lacusprofundi		 q Nph
Natronomonas
pharaonis		 x Hwa
Haloquadratum
walsbyi
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rrnAC2317

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NP3890A

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Pairwise sequence scores
Consensus score1328 rrnAC2317 NP3890A
593rrnAC2317 727 375
1110NP3890A 375 1316 

177 symbols
consensus       MSNDSKRLDELEGQLNALQQGHDNAWDAIEDLQDELQEVRTEQRRLQEDQDDLHDAVDHI
#oth            111111111111111111111111111111111111111111111111111111111111
rrnAC2317       ------------------------------------------------------------
NP3890A         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       DSRTDLLRLVENSDEMSGKQRAVALIQHLRRAAKARRRRDRAAAASINRDEAERALQYPN
#oth            111111111111111......1.1.1...1...11111.111111111.1...1..1..1
rrnAC2317       ---------------::::::::T:V:::H::::::E:::EPP::TVD:::::E::H:::
NP3890A         :::::::::::::::::::::S:::::::::::MRE:E:G:::KV::::E:::::::::D

consensus       IDRTTIYRDMDRAARLIGDGDALQYENGEGGDSRLRLNLDAGELPRKLTADQEGRNL
#oth            1......1..1..1..11.111.1.11.111111.1.1.11.1..1.1.1111.111
rrnAC2317       ::::::::::E::::::-:::::::T:::-----:::D::::S::::Y::::::E::
NP3890A         V::::::T:::::E::V::KEI:W::S:S::::::K:::EV::::T:::QEHG::--