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2 genomes BUD4099 2 proteins
a Hsa
Halobacterium
sp. NRC-1		 b Hma
Haloarcula
marismortui		 f Hvo
Haloferax
volcanii		 g Hbo
Halogeometricum
borinquense		 h Hmu
Halomicrobium
mukohataei		 i Hut
Halorhabdus
utahensis		 j Hla
Halorubrum
lacusprofundi		 q Nph
Natronomonas
pharaonis		 x Hwa
Haloquadratum
walsbyi
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rrnB0266

 - - - - -

NP3416A

 -

Pairwise sequence scores
Consensus score3648 rrnB0266 NP3416A
1829rrnB0266 2609 1133
2952NP3416A 1133 3547 

472 symbols
consensus       MTAFRDHLQRLEQDGDALAVESDLHTVDEVAMVGYESLKHNGPAITYENTAGVVRLASGA
#oth            111111111111111111111111111111111111111111111111111111111111
rrnB0266        ------------------------------------------------------------
NP3416A         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       YAGPDQLQPHEQKMWPAIALAVGLDTGTSYAELLEYTTGLRETTPVAENGTEPLDARPAG
#oth            11111111111111.111111111111111111111111111111111111111111111
rrnB0266        -------------::::VT-----------------------------------------
NP3416A         :::::::::::::P:TR:::::::::::::::::::::::::::::::::::::::::::

consensus       IDLGDLGLASPPTADGGMATLGIFAVGGDRTHWAPVRGRVRGGNRLRVRIPDALGEELAD
#oth            11111..11111.11.11111111111111.1.1..1.1.1.111...11.11.111111
rrnB0266        -----::V::VS::::--------------::::::H:S:V::DT::::V::::SSLV::
NP3416A         ::::::::PV:::CE::::::::::::::::T:S::::::::P:::::S::ER:::::GT

consensus       RARMTIALGVPCAAILSAYLPWFLAARQREAFPIARCGVPDSLPLSRHRGGLIPSASEVV
#oth            1111.11....11.111...111111111111.1111111111111111.1.1.111...
rrnB0266        GTT::::::::P:::TT:::---::VTEQTTT::QS:::TGTV::VPTN:::V:::T:::
NP3416A         :::V:VS:::::D:L::::::::TG::::::::V::G--::::SV:::::M:::TS::::

consensus       IDGRVVDRAGALREDRRAGWERLLDSGPLDIAINEIRARNSPTIPIAPLGAPLADDIQLA
#oth            1111..111111111111...111111111111111.1111.11.1111.1..1.....1
rrnB0266        :ETT::::QPDF:S:::E:::YVVV::::SLSVESV::TDT:V:::S:V:R::::::::T
NP3416A         V:::::GD::::-:EPL::::::::TTTV::::::::T:::::V:F:S:::::S::::::

consensus       GLAEAAKLHRRINNYWGISPIEWLLIPAEARLNICIVASDILYAGFEWQLANALFSFSDL
#oth            ..11..1.11.1.1...1..1..111.1..1.11.1...11..1........1..1..11
rrnB0266        :::T::T:YH:V::::::::V::VML::::E:G::F::::V::G::::::::I:::::S:
NP3416A         ::L::::::::::S:::V:::::::::P:::::F:::::E:::::::::::::::T:::S

consensus       FDKVLILDEDVPPQDLGRALADMWLKAHPARNWIFSEPDAPAATAPHYRQDNETGSRLYV
#oth            ..1.1.1.1...11.1.11.1.1.1.1..111.1..11...1..1.1..1.11.......
rrnB0266        ::T:V:V::::::::F::V:::V:::S::::D:T::::::::::R::::T::::::::::
NP3416A         ::::::::T:::ST:::K::Q:::V::::SH:::::TS:::R::::L::::GS:::::::

consensus       NAAWDARWDQEYIAPRVGFQNSFPENIRAAARALWDEMDFGDEDTTESGASR
#oth            1.1..1..111......1.11...1111111.11.1111111.111111111
rrnB0266        :::::P::KET::::::T::::::G:V:DV:::::::S:T:P::::::::::
NP3416A         D:T::::::::::::::::EE::::E:Q::V:ES:TS:G:S::---------