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2 genomes BUD4100 2 proteins
a Hsa
Halobacterium
sp. NRC-1		 b Hma
Haloarcula
marismortui		 f Hvo
Haloferax
volcanii		 g Hbo
Halogeometricum
borinquense		 h Hmu
Halomicrobium
mukohataei		 i Hut
Halorhabdus
utahensis		 j Hla
Halorubrum
lacusprofundi		 q Nph
Natronomonas
pharaonis		 x Hwa
Haloquadratum
walsbyi
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rrnB0268

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NP3412A

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Pairwise sequence scores
Consensus score1215 rrnB0268 NP3412A
816rrnB0268 1214 455
854NP3412A 455 1223 

164 symbols
consensus       MSREYITSRDHLPDDAQAEHRLQITDAQTKRIFEARVRIAKDKAELADPAPLTIRAGPHE
#oth            .111....111..11111.11..1...1..1...11.....11...1..1..1111....
rrnB0268        ::SH::::T::::EE::::TT:::::::::::::::::::::P:::T::E::::V:::::
NP3412A         :V:::::::EY::::PEG:::::L:::E::E:::TQ:::::S::::::::::VV:G::::

consensus       DSHEARYVELLDEDAAGEIDRELLADCAADAQSASNIINARSADLKALLCYLVEKGEFES
#oth            111.11....11111111..1..111111111111111.1..11..11.1....1.11..
rrnB0268        SVS:T::::::::TD:TG::H::V:HL::EQET::::L:T::D:::V::Q::::T::Y::
NP3412A         :::::W::::VES::G::::::::R::LE::::GTDV::::::E:::V::::::::V:::

consensus       QADAARELAFDHLADDRRALLRALAEVRRELDDDDLRAALGRQE
#oth            111.1.111111..11111..11111.11.11111.111..111
rrnB0268        T:::L::V::::::TE:P:::D:Y::::::P:::P::RV::K::
NP3412A         :SE:::S:LWEK::::H:P:::Q:DG:CD::EES::D:::::--