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2 genomes BUD4105 2 proteins
a Hsa
Halobacterium
sp. NRC-1		 b Hma
Haloarcula
marismortui		 f Hvo
Haloferax
volcanii		 g Hbo
Halogeometricum
borinquense		 h Hmu
Halomicrobium
mukohataei		 i Hut
Halorhabdus
utahensis		 j Hla
Halorubrum
lacusprofundi		 q Nph
Natronomonas
pharaonis		 x Hwa
Haloquadratum
walsbyi
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rrnAC2168

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NP0682A

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Pairwise sequence scores
Consensus score978 rrnAC2168 NP0682A
668rrnAC2168 897 384
694NP0682A 384 984 

135 symbols
consensus       MSGDALLLVEDSDFLASQLQDALRAAHNMAVAVAETAAEAARRLADNDIDCLVTNTDLPD
#oth            .11111......1.11111111.1111111.1.11..1..111111.11..1.1.11...
rrnAC2168       :TT:R::::::::::GT:::::::-GY:F::::VS::R::::HV:Q:EV::V:::Y::::
NP0682A         :::P:V::::::G:M::HVSGT:E:::G:D:R::::::::RQ::R::::::::V::Q:::

consensus       ENGIALARSIQQSADLPDSLPSLLLTGEELEDIAAEALDAGVTDFVHKDNHAGDSMNIFA
#oth            .1.1111.111111...1.1.1..1.111.111....11...1.1.1.1111.11.111.
rrnAC2168       :T::::::------:::::::V::::TT::KS::::::E:::::::::::IV:E-:::V:
NP0682A         :::VEFV::::::::::-:M::::F:::F:::V::::F::::V:V:S:EH::::::VV::

consensus       NRIKVAIRAGRQRLE
#oth            ..11.111.111111
rrnAC2168       ::VS:VV::::E---
NP0682A         :::::::D:FE::::