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2 genomes BUD4108 2 proteins
a Hsa
Halobacterium
sp. NRC-1		 b Hma
Haloarcula
marismortui		 f Hvo
Haloferax
volcanii		 g Hbo
Halogeometricum
borinquense		 h Hmu
Halomicrobium
mukohataei		 i Hut
Halorhabdus
utahensis		 j Hla
Halorubrum
lacusprofundi		 q Nph
Natronomonas
pharaonis		 x Hwa
Haloquadratum
walsbyi
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rrnAC1376

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NP2042A

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Pairwise sequence scores
Consensus score1307 rrnAC1376 NP2042A
893rrnAC1376 1291 457
871NP2042A 457 1170 

173 symbols
consensus       MDRRTRALVGGVGIAVLLAALATTTMGAAAEFTTPTDIEDDNDYNNDRVNLEGQVIDIEQ
#oth            .111.111....1.1..1111.1....1....1...1111111.1111.1...1.1.1.1
rrnAC1376       :QTK::L:::::L:P::FG:M:V::::G::::::::K:T:T:E::G:::::::I::::::
NP2042A         :::::K:V:::::::::::I::::::::::::V::::L:E:D::Q:EL:K:::::T:L:E

consensus       TNDQIAFAVDDENESKAVTYDGEMPETMSEGRIVVAEGHFNGETLEADDLSIRAHEGEHP
#oth            111111.1.1.1.1111.1...1......1..1...1.111.1111.11.11........
rrnAC1376       ::::LS:N:T:::::VP:V:::P::::::V::T:::K:YY::SVV::ES:::::::::::
NP2042A         -GPP:::::::G:YT:::::::::::::::::::::::::D::::V::::TV::::::::

consensus       ADHNNGTDADAHDEEHMNGDHANDNGDENKDAYGNVSSDNGTNSEQVVAARPV
#oth            11.111111..1111111.111111.111111.11111111111111111111
rrnAC1376       :G:::S:EY::TKY:S:::T:::VT:H::VT::::::::::::::::::::::
NP2042A         D::PG:V:::::::S:FE::SDY::::YD::D:--------------------