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2 genomes BUD4111 2 proteins
a Hsa
Halobacterium
sp. NRC-1		 b Hma
Haloarcula
marismortui		 f Hvo
Haloferax
volcanii		 g Hbo
Halogeometricum
borinquense		 h Hmu
Halomicrobium
mukohataei		 i Hut
Halorhabdus
utahensis		 j Hla
Halorubrum
lacusprofundi		 q Nph
Natronomonas
pharaonis		 x Hwa
Haloquadratum
walsbyi
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rrnAC1371

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NP4382A

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Pairwise sequence scores
Consensus score1222 rrnAC1371 NP4382A
978rrnAC1371 1209 722
966NP4382A 722 1241 

156 symbols
consensus       MNARKTITIAFLLAVLGFGYYSMNAAPVLRDDAHTYQGGLQWEEDPDEALDAAQDQDKPV
#oth            ..1..1....1111...1..........11.111......1.11..11..11..11....
rrnAC1371       :::::::::::F:V:::V::::::::::V:::::::::::E::T::GT::::::S:::::
NP4382A         ::P::V::::V:V::::::::::::::::S:HDY::::::::H:::::::SI:::E::::

consensus       LVYYWATWCTYCQRYDENHYRNDEIRAALDAYTLLAINIDDPGNGAALAADHQASYPPQH
#oth            .....1......11..1...1111..111.1.1.....1....1.111111.1.1.....
rrnAC1371       ::::::::::::E:::K:::::ET::::M:D:V::::::::::::T::VRQ:::T:::::
NP4382A         :::::T:::::::T::::::QH::::DT::::::::::L::::P::SM::::G:::::::

consensus       RIMTPNGDEIEQLEGFIERDQLLAEIEKALEAASNE
#oth            11...1.1111111.111..11.111.111111111
rrnAC1371       ::::::::TV:SV::Y:G::E:::TL::RS:E:T--
NP4382A         VM:::D:E::S::G::V::::F:Q:::S::G:V:::