|
Pairwise sequence scores | |||
---|---|---|---|
Consensus score | 5591 | hla2005 | NP3710A |
5113 | hla2005 | 5586 | 2799 |
3277 | NP3710A | 2799 | 3642 |
722 symbols consensus MSSDGDEPTETICPYCGVGCGIKINQDTDDPGDVQFMPWGEAPVNEGRVCIKGGAATQVI #oth ..1111..11.............11.11......1......................1.1 hla2005 ::TE::::VK:::::::::::::V::G-::::::S::::::::::::::::::::::::V NP3710A ::::PS::::::::::::::::::T::::::::::::::::::::::::::::::::E:: consensus DHEDRLTEPLIKDDEEFREASWEEAYERIVAELERIRDENDPDAMGFFGSSKTMNEENYL #oth ............111.....1...1.11..1.1......11...............1... hla2005 ::::::::::::E:G:::::T:::::S:::S:M::::::::::::::::::::::::::: NP3710A :::::::::::::G::::::::::C::Y:::::::::::YG:::::::::::::::G::: consensus LQKIARRYGTNNVDNCTRMCHASTVWALRRSLGAGAMTNSMEDIRESADLLWIQGANPGE #oth 1..1.........................1...1.......1.11....11......... hla2005 :::::::::::::::::::::::::::::::::::::::::V:LE::::VF::::::::: NP3710A F::L:::::::::::::::::::::::::T:::M:::::::::::::::::::::::::: consensus QHPIANSQYLRQAALDGATVIQVDPHANGTTRSLEIEATDRHQHLQLNPGADIPLLNIVL #oth .....1...1...1.1............1..1.11111....1...1...1......1.. hla2005 :::::::::F:::V:E::::::::::::K::::FK:GE::::M:::V::::::::::::: NP3710A :::::T:::::::::::::::::::::::::E:::V::::::::::::::T::::::V:: consensus KTILDRHAEEPDAGWIDAAFIDERTEGFDDLQATLDDFDAQAAAEEAGVPLEDIQRAAEK #oth ....11.1.1.11..1.11.111.....11.11..11..11.....1.......11..1. hla2005 ::::E::E:::::::::E:::::::::::H:KE::E:::KE:::::::::::::EL:::: NP3710A :::::H:::H:ED::V::S:VES:::::E:::::::G:::::::::C:::::::::::K: consensus YAMANNAAIFTGMGMSQHACGVDNVQNEINLALITGNLGRPGTGINPLRGQNNVQGTCDV #oth ..1.1.............1..................1.1....1............1.. hla2005 ::::::::::::::::::T::::::::::::::::::::K::::V::::::::::::S:: NP3710A ::T:D::::::::::::::::::::::::::::::::V:::::::::::::::::::::: consensus GAMPNVLPGYQLVNDDAARGAVEDIWGFEIPDAPGLTNVEISHEAGDSVHGLYVMGENPI #oth .1.........1.1..1..11..11....1..1.......1...1.1..1.........1 hla2005 :::::::::::P::::E:::S:::V::::V::E:::::::::::::H::K:::::::::: NP3710A :V:::::::::::D:::::S:::E::::::::::::::::L:::F::::::::::::::V consensus MSEPDANRVAERIKDLEFMVAQDIFMTETAEFADVVLPATTWAERGGTVTNSDRRVQRMR #oth .....1.1.1..1.1.....111111111111111111111111111111.11.1.1111 hla2005 :::::G:E:E::L:S::::::::::::::::::::::::::::::::::::T:::::::: NP3710A ::::::::::::::::::::V-----------------------------::P:G:K--- consensus GAEMVHENTKHDLDILMEVGSRLFSEDEFRFDDVEAVFEELREVCPIYHGMTYDALGETG #oth 111111111111111111111111111111111111111111111111111111111111 hla2005 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP3710A ------------------------------------------------------------ consensus IQWPCYEEGDQGDQYLYEDSFDTESGLGHIEGVRHQPPAEVPDEEYPLILTTARLEEHYN #oth 111111111111111111111111111111111111111111111111111111111111 hla2005 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP3710A ------------------------------------------------------------ consensus TGTMSRRSPTLMRQHPRNFLDVHPNDAEEYGIEDGDMVTLRSRRGEIEVKAQVTEDIQRR #oth 111111111111111.11.11111111111111111111111111111111111111111 hla2005 ::::::::::::::::E::V:::::::::::::::::::::::::::::::::::::KEG NP3710A ---------------::G::------------------------------------L::: consensus ALHSQPHFAAASANRLTNDVLDERAKIPEYKAAAADIAVTVSDGGERVDDAEPDAGSEPG #oth 11111.1111111111111111111111111111111111111111111111111111.. hla2005 VVWTT::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP3710A ::::::----------------------------------------------------:: consensus DA #oth 11 hla2005 :D NP3710A E: