2 genomes BUD4249 2 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC2873 - - - - - - HQ3380A

Pairwise sequence scores
Consensus score	1977	rrnAC2873	HQ3380A
1693	rrnAC2873	1935	1402
1686	HQ3380A	1402	1998

273 symbols
consensus       MIEPDRIDRFRRLAERGAGRLPGIVVALTLLFLYIPVLVIAYLSLSPAGQPTIPIDAFSL
#oth            11111111111..111.......1..1..11...1....11...1..1.......11...
rrnAC2873       -----MVS:VT:::::::::::::::::::V:::T:::::G:::::::::::::::::::
HQ3380A         ::::::::N::::LKY:::::::V::I::V:::::::::V::::V::S:::::::EE:::

consensus       RWYIAVLTDQRFIRALLTSIGIGVFSAIGGTALGLAGAYSITRSDLPRLARRAIAVIIAL
#oth            1..11....1..1...1..1.1..11.1...1.......1111.1.1111111.1...1.
rrnAC2873       :::T:::::T:::::::::L::::VT:T:::::::::::V:V::Q::Q::::S:::::::
HQ3380A         Q:::D:::::::L:::M::::L:::::::::I::::::::L:W:::S:PIQQ::G:::S:

consensus       PLFVPTVVLAFGIGRAAAHIGIGFGLLPVALGHLFWVLPFTTFLIAARYAELDNRLQAAA
#oth            ........1.....111111.1.1.11..11......................11.1...
rrnAC2873       ::::::::V:::::::S:LV:L:Y:Y:::I::::::::::::::::::::::::::S:::
HQ3380A         ::::::::::::::VT:G::::::::V:::V::::::::::::::::::::::IQ:::::

consensus       RDLGADDRTVFRTITLPLLRPAIIASALFAFALSFNEFLITFFLAGSGITTVPLEIFGKV
#oth            .....111.....1.1...1..11..1....................11...........
rrnAC2873       :::::::::::::::V:::W::LM::V::::::::::::::::::::SV:::::::::::
HQ3380A         :::::TEW:::::V::::::::::::::::::::::::::::::::::::::::::::::

consensus       RIGATAFLNAASVLVIAVSAVAAGVASTLRRPI
#oth            .1..1..........11....1......1...1
rrnAC2873       ::::::::::::::::V:::::::::::::::V
HQ3380A         :V::V::::::::::L:::::L::::::F::::