Home |  Text search
2 genomes BUD4252 2 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC2027

- - - - - -

HQ1011A

Pairwise sequence scores
Consensus score5694 rrnAC2027 HQ1011A
3629rrnAC2027 5101 2147
4212HQ1011A 2147 5705

773 symbols
consensus       MMQRLAATISIDEALPPDTVRLRWPPIDATTHNEDIADPTTNDSALGLDANGAVQIRKQR
#oth            1111111.111.11111111111111111111111..11..111111.11111.11.111
rrnAC2027       :V:N:EL:::V:::------------------::S::V:::VGTR:::GG::::L:::::
HQ1011A         -:K:V:::VT::PE::::::::::::::::::TY::::S::::::SP:::D-V::L:TSN

consensus       GRMQAATVRQADMIDADTAAVGPNLAAALDIRADVKNTSETDTGRTVDGDRNAQTDHVAT
#oth            .111..1..11111111.11.1111.11.111111111111111111.1.111111111.
rrnAC2027       :QV:::::::::SVP:E::R:::QT:ET:GL:---------------::::-------V:
HQ1011A         :::T::V::PDS:::P::I::SS::::::::S::::::::::::::::S:Q:::::::::

consensus       VEAADAAPAHQISVAPVAQLSIRGGEQLVRDALDDRPLLRGDTIPTILLDGSLELPVRVT
#oth            ..1.1111.1111....11...1...11..1.111...11....11111....11....1
rrnAC2027       :::::P:V:TH::::::P::::::::G:::::VG:::::D::::TVS:F::::TV::::V
HQ1011A         ::P:S:S::::LT:::::E:::S::::T::Q:::T:::V::::::::F::::::::::::

consensus       ETRPAGPVAITADTEIEIEDGPAPRRSNPQQAPIAESAVGGYADIIATCQHAIADALIAS
#oth            1.1.1...11111.111111....11111111.11111....11111.11111111.11.
rrnAC2027       S:Q:::::TLVD::V:::T:::::::::SGLD:L::T:::::::TV::LET:VST::L::
HQ1011A         ::::D:::::::K::LKL:S::::DLTL::::::PP:G::::NE::E::::T:::P::Y:

consensus       DAYHGDDRNAASGVLLEGAHGVGKTHLIRHTAWLANATIRSIDAARLASQDQDDARAELD
#oth            .111111.11.1....1.11.......11.1..111...111.111.1.111111111..
rrnAC2027       :DVP:SV::R:-::::V::::::::::LQ:V:::V::::H:V::G::L:L:::G:::Y::
HQ1011A         ::::V:::S:::::::::QS:::::::::::::Y:D::::T::C:T::::SPS:LTD:::

consensus       DHTAARAAQNAERGIVHIDNLDIIGADNDDKARQILRQWIDDILQLDGAAAVAEATDADA
#oth            1111.111111111..1..1..1111.11111.11111.111111..1111.1.1.11.1
rrnAC2027       :--V:::::GS::::::::G::TVS::GG::T:LL::::L:::ST:::V:::G:::SE:D
HQ1011A         S::::ITTG::TST::L::::::::E:::TV::::-SS::EKT::::S:TV:::C:::::

consensus       IDSDITRAGRLSRIISVPAPSRRDRAAIIKTLANDAMTSAEADLKATAEQALGYVAADIL
#oth            111111111....111.11.111...1.11111111111111.11.11..11.......1
rrnAC2027       VPV::VQ:T::::TVT::E:::::::E:L::V:TG::V:::::::::G:::F:::::::V
HQ1011A         :::IF::G:::::::::T::TPD::::::SV:F::IP:TSHI:YT:V:::T:::::::::

consensus       ALRARAIEAALARCNVDSTDEAAEDEFRVLAADIEAARDATEPSAARGTTGEIPSTSFED
#oth            1.111.1...11.111111111111111.11..1.1.11111..1111.1111.....1.
rrnAC2027       ::WLH:V:::V::------:G:GG:PVV:S:::L::::::V:::GI:::VP:::::::S:
HQ1011A         N::::::::::T:::::::E:M::T:::::P::::T:ITK:T::::E-:::SV:::::::

consensus       IGGLAAPKRELIRAVNWPLQKPDALDRLDIDAPAGVLLYGPPGTGKTMLARAVASTSDAN
#oth            ....11.....1...1...11.11111.11.1........................1...
rrnAC2027       ::::DG:::::::::::::T:::LF:S::::P::::::::::::::::::::::::::::
HQ1011A         :::::::::::T:::E::::Y:E::S::GV::::::::::::::::::::::::::T:::

consensus       FIPVNGPELLNKYVGESERAVRRLFDRARDNAPAIVFFDEIDALGSARADDNDSGASART
#oth            .11.1....1.........1..11.11..11..11.....1....11.11.1..1.11.1
rrnAC2027       :::::::::M:::::::::::::V::Q::S:::S:::::::::::TT:S:::::::::::
HQ1011A         :LT:D::::::::::::::R::Q::T::::S:::V:::::V::::::::G:G::S:TE:V

consensus       VSQLLTELDGIEGREQVTVIAATNRRDRIDDALLRPGRFDRIVEVPLPDAAARAEIIRIH
#oth            ..........111..1....11...1..1....1.1.....1...1...111.1..111.
rrnAC2027       :::::::::::::::G:::::T::::::L::::::T:::::::::S:::::D::::FDT:
HQ1011A         ::::::::::LHP:::::::G::::P:::::::T:::::::V:::::::PE::Q::::::

consensus       IRDRITEQLDIDAIAARTAGYSGSDIAAVLREAGLLAIEEHLRAAESEIIDEDRSREPNS
#oth            11..1.111.1111.11.1.......1..11..1...1....1.111111.11.111.11
rrnAC2027       :G::::G:V:LE:F:::::::::::::::V::::::::::::::QG----:S::::K:--
HQ1011A         T:::P::P::::E::TK:E:::::::S:::Q::S:::L::::G:::::::::T:TI::::

consensus       GQSTSSSATPEAIESIEAVRIRRRHLDAALDRIEPSGAAQARERYASFDGHRS
#oth            111111111111111111.11111.111..11111.1111.1.111111.11.
rrnAC2027       ------------------:SL:ES::EK::QSV:S:::D::G:-----T::::
HQ1011A         :::::::::::::::::::::H:::V:::::::G::LS:T::::::::::TG: