2 genomes BUD4263 2 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC2868 - - - - - - HQ3383A

Pairwise sequence scores
Consensus score	2774	rrnAC2868	HQ3383A
2527	rrnAC2868	2765	2180
2427	HQ3383A	2180	2729

357 symbols
consensus       MAIDQSASRRGFLAGVGAAATAGLAGCAGIGFGDQTLTMIDWGYVYNNDVIEAFEDRHGV
#oth            111.1.11..1..1.......11....1.1.1.1............111...1..1....
rrnAC2868       ::M:::::::S::T:::::::::::::T:L::::::::::::::::S::::::::E::::
HQ3383A         -M::K:--:::::::::::::TS::::::::S:S:::::::::::::DG:::E:::::::

consensus       TVERQAAQGSAETLAALRAGRADYDLVPLGNYAVKPAMDEGYIQPLDIDQIPAYDDIFDF
#oth            ...............1..................1...1...1....1..1.....1...
rrnAC2868       :::::::::::::::Q::::::::::::::::::T:::E:::L::::L::V:::::V:::
HQ3383A         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       LKADYFEQDGDIYGIPRSFGQTPLAVNTDIVEQDITALADLWSDPLAGVSGGRDDARLQV
#oth            ..11...1..11..1............1.1..111.......111.1..1..........
rrnAC2868       ::::::::::EV::::::::::::::::::::::V:::::::TE:::::V::::::::::
HQ3383A         ::KP:::T::::::S::::::::::::V:L::TE::::::::::S:N:::::::::::::

consensus       LYRNAAKDEPLNPSRADDIDFDALRSDLIDRLELTGGLWNNGGESEQLLRNEEVGVQPVW
#oth            ......111....11.111...1.11...1...1.1..........1...1.........
rrnAC2868       :::::::G:::::T::::V:::S::T:::::::::S::::::::::::::S:::::::::
HQ3383A         ::::::F:T:::::S:SE::::::Q::::E:::V::::::::::::S:::::::::::::

consensus       NYVIQSMQDDGIPVERVYPAEGTKAWFIQHCIRAEAENPELAHTFIQEWHTQMGYRSLME
#oth            .....1..1..1.......1..........1.111................1...1....
rrnAC2868       ::::::::S::::::::::::::::::::::::DG::::::::::::::::::::K::::
HQ3383A         :::::T:::::L:::::::S::::::::::T:H::::::::::::::::::M::::::::

consensus       PNNIAVPNDQVFSEQDVERAAYGLDNPDRFIYEDPKPQELIEQYANTWNRAKTEANL
#oth            .1......1........1111....1..1....1...11..1..11..11.....11
rrnAC2868       :S::::::E:::::::::K::::::D::Q::::E::::P:::::TE:::::::::D:
HQ3383A         :::::::::::::::::T:ES::::::::::::::::P:::K::::::SQ::::::-