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2 genomes BUD4284 2 proteins
a Hsa
Halobacterium
sp. NRC-1		 b Hma
Haloarcula
marismortui		 f Hvo
Haloferax
volcanii		 g Hbo
Halogeometricum
borinquense		 h Hmu
Halomicrobium
mukohataei		 i Hut
Halorhabdus
utahensis		 j Hla
Halorubrum
lacusprofundi		 q Nph
Natronomonas
pharaonis		 x Hwa
Haloquadratum
walsbyi
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rrnAC2596

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HQ1031A

Pairwise sequence scores
Consensus score897 rrnAC2596 HQ1031A
505rrnAC2596 790 267
659HQ1031A 267 894 

115 symbols
consensus       MKKSYYEMNIRNRHGDPVDPVPFIVCTASAWLLCLSFGPLYGDAFGIPWTAGLLTCAAGA
#oth            11111111111....11......1.1.11111.11.1....1111.1.111..1111111
rrnAC2596       -------::V:::::::::::::L::::T:VM:LF:V:::::L:Y:L:VW:::TVST::T
HQ1031A         :::::::YL:T::::ET::::::::I:G:T:::::::::::L:L::::::Q::::::IL:

consensus       VAAAAWAYRRLVWTADPASQRIAPAGIRFQRLCLGGVGFATILIALAAIAALMIA
#oth            .11111..1.1...11.111111.111..1..111..1.111.1111111.1111
rrnAC2596       ::V::V::H::::::P:P:V::::E-L:::::IYI:::::VL:V:VS:PL::---
HQ1031A         :V:SS:::::F:::V:::V:DSL::::::H:::::::I:G::::I::F:::V:::