Home |  Text search
2 genomes BUD4285 2 proteins
a Hsa
Halobacterium
sp. NRC-1		 b Hma
Haloarcula
marismortui		 f Hvo
Haloferax
volcanii		 g Hbo
Halogeometricum
borinquense		 h Hmu
Halomicrobium
mukohataei		 i Hut
Halorhabdus
utahensis		 j Hla
Halorubrum
lacusprofundi		 q Nph
Natronomonas
pharaonis		 x Hwa
Haloquadratum
walsbyi
-

rrnAC2325

 - - - - - -

HQ2027A

Pairwise sequence scores
Consensus score4780 rrnAC2325 HQ2027A
3954rrnAC2325 4778 3174
4000HQ2027A 3174 4765 

628 symbols
consensus       MLIYENTKSGLLDDILADRLVSRIEAGYAAHGIGGGAPNEIRAWRNSLQYIHKVLANSEI
#oth            .11..1....1.1.1.111...1.111.111.1.11111.1.1.1..1..1.1..11.11
rrnAC2325       ::::::::::::K:::S:D:::::::K:::K:L::VS:::K::::::F::::::::G:::
HQ2027A         :FV::S::::F:::V::G::::E:KR::QS::::M::SS:::S:K:::::M:T::I::SV

consensus       PDNAGVAIEFKIPLTSRRVDLLISGRDNADNANVIIIELKQWEGDDTQRVADKDGIVETP
#oth            ..1.................111..1.111....111.....1.11.11.11.....1.1
rrnAC2325       ::D::::::::::::::::::M:::::KDG::::VVV:::::::E::E::SG:::::::Y
HQ2027A         ::::::::::::::::::::F:L::Y::::::::::::::::S::S::M::::::::K::

consensus       LGGGIRETTHPSYQASAYANLLRDFNIQIREKPINLHPLAYLHNFEPEHREAIDNEIYAP
#oth            1....1.........11..11.1...1111.1....1.1.....1.1.1.111...1.11
rrnAC2325       V::::::::::::::W::::F::::::::Q:T::::::V:::::Y:::Y:S:::::::::
HQ2027A         :::::H::::::::::S::Q::K:::VTV:::::::Y:::::::::S::::KL:::T:QS

consensus       YIAEAPLYIREDARQLRDFLAERIDTGDRRENLREIANGGIRPAKSLQRSLQEMLNRNDE
#oth            .111....111.1111.111111.11..1111.1.111111..1....1.111..1111.
rrnAC2325       :TE:::::LKG::VEF::Y:E:::QV:::G:L:::::DS:L::S::::D:V:::::G:H:
HQ2027A         :::K::::::::T::::E:V:SQ:::::N:K::Y:MS::K:::::::::::LS::E:Q::

consensus       FTLIDSQKVVFERAVELAEQCRRDGQKRVLLIEGEPGTGKTVVAINILAELIQNDLIAQY
#oth            ...1........1.....1.111........1..1................1.1.111..
rrnAC2325       :::L:::::::::::::::::QE::::::::V:::::::::::::::::::L::::T:::
HQ2027A         ::::::::::::K:::::I:S:::::::::::::G::::::::::::::::::Q:M:T::

consensus       VSKNAAPRDVYEQKLRGDKLVKQINHLFKGAGSFVDEEANAIPALIADEAHRLNEESNFF
#oth            ....1.............11..1.1...1....1.11.1.11...............1..
rrnAC2325       ::::::::::::::::::MM::T::::::::::Y:::::::V::::::::::::::::::
HQ2027A         ::::R:::::::::::::::::::K:::T::::::ET:T:T::::::::::::::::T::

consensus       GRGENQIMEIINAAQFSVFFIDENQRVHIDDIGSKDEIRQHARNLNADIEEMALESQLRC
#oth            ..............1........1...........1...11.11.1.1.1.11.1..1..
rrnAC2325       :::::::::::::::::::::::S:::::::::::::::KF:DE:G:E:K:T::::::::
HQ2027A         ::::::::::::::K::::::::::::::::::::Q::::::::::::::::T:T::F::

consensus       NGSRDYIAWVDDMLQIRDTANADDIDLDFDIRLFDSPEALHEAIERKNNQNRLSRVVAGY
#oth            1..11.11....1.1.11.1111111.11.111....11..1.1.1..1.111.......
rrnAC2325       G::G:::E::::V:E:G::ETPE::G::Y:V:::::::T::::V::::E:TD::::::::
HQ2027A         ::::G:V::::::::::Q:::::GF::E:::HV::::H:::T:::Q::::::V:::::::

consensus       CWEWDKDGRADPDISDIEIGNYRRSWNLDSNDPWAIDEGSIDQVGCIHTCQGLEFDYVGV
#oth            ....11..11..111..1..1.1.....111.....1.....1.................
rrnAC2325       :::::T::QS:::YV:::::D:::::::K:S:::::::::::E:::::::::::::::::
HQ2027A         ::::E:::::::S::::T::::E::::::T::::::T:::::::::::::::::::::::

consensus       IIGEDLRYRNGDIITDHEERASSDRSLFGIKKMFRENPNEAAELAEELIKNTYRTLLTRG
#oth            ...1..1..1.1..1.1.....1...1..1....1.1.11.1.1.1.1........1...
rrnAC2325       :::P:::::::E::::Y:::::::::V::M::::D:E:E::Q:::G::::::::::M:::
HQ2027A         ::::::K::D::::V:::::::T::::::::::::::::K:::T:::V::::::::::::

consensus       MKGCYIYCCDDELQAYLQERLDAIAENS
#oth            .....1........1..11.11111111
rrnAC2325       :::::::::::::::::::::::V::--
HQ2027A         :::::L::::::::S::KT:VEN:SI::