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2 genomes BUD4334 3 proteins
a Hsa
Halobacterium
sp. NRC-1		 b Hma
Haloarcula
marismortui		 f Hvo
Haloferax
volcanii		 g Hbo
Halogeometricum
borinquense		 h Hmu
Halomicrobium
mukohataei		 i Hut
Halorhabdus
utahensis		 j Hla
Halorubrum
lacusprofundi		 q Nph
Natronomonas
pharaonis		 x Hwa
Haloquadratum
walsbyi
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Hbo0978

 - - - -

HQ1457A

HQ3483A

Pairwise sequence scores
Consensus score1230 HQ3483A Hbo0978 HQ1457A
679HQ3483A 1263 398 434
794Hbo0978 398 1024 628
861HQ1457A 434 628 1311 

174 symbols
consensus       MTEDHLRATVSLRGVLFAPDGDVLVVARSSDRQWELPGGRLGADEDAIRGVQREIAEETG
#oth            ...11.2....1...121.11211112.11.22........122.1122.12..12....
HQ3483A         ::::::C::::V::::TD:H:QLI::Q::::::::::::::AP::PP:::LK::LI::::
Hbo0978         :::KP:::::::::::::::::::::R:TT:EG::::::::::Y:::SE:::::::::::
HQ1457A         ::::::E::::::::IV:::KE::IM:::::GE:::::::::RH:::VD::H:::T::::

consensus       LNVAIGQPVHADAWRNDDDDGRFAVYYDCTVN--EQDVQLSHEHIDAQWLSPQAAEDRLS
#oth            1212211111.21.1..1121..1...2111211122.2..1..1122.2..21111211
HQ3483A         IS::VETILC::S:I::RTQD::::::T:SCETP:S::I::E::::C::M::S:V:TV:C
Hbo0978         :::EL::::::I:::::::::::G:::YG::T::::T:S::::::EYE:V:::S::::::
HQ1457A         :DAT:::::::V:::::::C::::::::::::::SKE:::::::T::T::::T::K:QV:

consensus       EAQATAVN---AGQDNASAIRDEEDRSGDSDAAMELSIEQDPRADE--------
#oth            .2121.111112222222222212221212222222222221221211111111
HQ3483A         :KHMA::R::::SL:TDVDLD:ST:Q:::T:V::S:VTT:S::S::::::::::
Hbo0978         :P:::::::::----:::EV:E:-----------------------::::::::
HQ1457A         :::R::I:IVAT::GQCT::ST::S::V::P:ES:S:::S::E::IGPEPERSS