2 genomes BUD4347 2 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - - - Hbo2966 - - - - HQ3539A

Pairwise sequence scores
Consensus score	2959	Hbo2966	HQ3539A
2463	Hbo2966	2924	1886
2382	HQ3539A	1886	2881

385 symbols
consensus       MRLAFVSNVIHPFITGGAQKRIHEIGTRLAARGHDITIYGRHFWDGPKEITHEGMTLRAV
#oth            .11......11.11....1...........11...1.............1....1.....
Hbo2966         :N:::::::VY::V::::E::::::::::::::::V:::::::::::::T::::V:::::
HQ3539A         ::V:::::::::Y:::::::::::::::::DN::::::::::::::::::::::::::::

consensus       APEHDLYTGSDDRRSIMEAIDFAARLAIPLRRRLRRNEHDLVVASVFPYFPVLAAQLAAL
#oth            1.111...11.11...1..11..11111..111.111...1............1.1.11.
Hbo2966         ::GT::::--::::::T::::::::::Y::SKQ::::::::::::::::::::S:K::::
HQ3539A         S:::E::::::GE::::::LK::KDVV:::::::--D:::V::::::::::::::::ST:

consensus       GKETPIVSTWHEVWRDYWDDYLGALAPFGKIVEGLTARTPQHPIAVSDITADRLREIGAE
#oth            .1.....1.......1..11...1..1...1..1....1..1.....11.....111.11
Hbo2966         :T:::::::::::::::::::::T::::::V::H:::::::::::::G::::::T:::PS
HQ3539A         :::::::T:::::::S::EE::::::T:::::::::::V::Y::::::L::::::KL:::

consensus       RDDIRTVPNGIDYAQIRNAPLPEENADHGFDVLFAGRLIADKNVDILINAFDRGAEAHDA
#oth            .11111......111.111.11111111.1.........1..1.11.11...11.111..
Hbo2966         ::::EV::::::VE:::::::::::GES:Y::::::::::::::SV::D:::SV::S:::
HQ3539A         :TKV::::::::::S:QET:----P::::::::::::::S::Q::::L:::::::P:-::

consensus       TLGIIGDGLERDALQRQAQAIDHADRITFLGFLDAYEDVLGQMRAADVFASPSTREGFGI
#oth            ....1...111.1.11...11.11111.......1..1..11.......1..........
Hbo2966         ::::::::::F:R::::::R::::::V::::::::::::::H::::::::::::::::::
HQ3539A         ::::V:::PK::::EM::::L:SSHQ::::::::E::E::K::::::::V::::::::::

consensus       TAAEAMAADCTVIGADHPDSAADEVIDNAGFLANPTAEDVAESLARALRGDQPPTDPQER
#oth            .11.....1......1..1..11..111..1..1..1.1..11.1...1.11.1.1.11.
Hbo2966         :Y:::::::::::::T::E:::S:::GD::Y::E::V:S:::::::::E::T:::::L::
HQ3539A         ::V:::::G::::::::::::V:::V:::::::::::::::PV:E:::::K::S:E::T:

consensus       AKRFDWDRVAELAEEAYEAAMRRDW
#oth            .11....1...1.11..11.1111.
Hbo2966         :T:::::T::::::S:::R:::GS:
HQ3539A         ::E::::::::S:L:::T::VT:::