2 genomes BUD4391 2 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - - - - - - hla2260 - HQ2687A

Pairwise sequence scores
Consensus score	3858	hla2260	HQ2687A
2572	hla2260	3720	1335
2621	HQ2687A	1335	3858

537 symbols
consensus       MTQNSENEHNTTEGGNSEQRDQNNIIRALGKSALLIFAGLFLELGISLAAKIIIARQLGR
#oth            111111111111111111111111.1.1.1..1111.1.11......111.11..11.11
hla2260         -----------------MFEK::S:::R:F::G::L::::V::::::F::::L:::L:::
HQ2687A         :::::::::::::::::::::TD::V:::::::VV::L:T::::::::IT:L:::Q::VP

consensus       AAYGEASIGITILLFASIILQLGMNTGIGRTIPRFDDEADRRGIMASALQLNAGISLICA
#oth            11..111..1.1.111.11111.11..11.11..11111..1.111.11.11111.111.
hla2260         P:::V:T::::T:S:::T::LF:::::V::YL:::::::::K:::::G::VVI:F:VS::
HQ2687A         :N:::V:::L::::VT::VS:::FD:::P:::::YEG-S::::VFI::F::::I::::L:

consensus       GLLFIAAEPFAARLLGAPAAKSVLRIAALGIPAAPLMRLAIGSTQGLQRSLPKVIIRNIG
#oth            111..1.11.1111..1.1111.1.1111.1.1111.111.111.111..1...111.11
hla2260         V::::F:::::T:V::::E:VV:V:::S::::F:VV:KFT::VV::::::::::L:::::
HQ2687A         :FV::::G-:I:D:::N::L:::::VV:F:V::M:::::::S:::SVG::V::::VQ:LL

consensus       QPITRFIIIGVSILLGAGAAGIAGAYSATNAAAALAACYFLLRRTRILRANIGANMRQRE
#oth            1..1.11111.1111.1111111...11.111111.11.11111.11.1111111111..
hla2260         :::V::SLVV::LYF:L:::::V::::::F:::G::GL:YV:T::N-::SSVT:::::::
HQ2687A         H::::V:::::T:::::TPVTV::::VV::WIG:V::::::V:H::::N::::WTPKH::

consensus       ILRFSAPLMATAALLMILGNFDILMIQYFRGSAEVGSYNIGYPIAQLLPAGLAALSFIAL
#oth            1111.1...1.111111.111.11.11...1.1...1.111.11.11.111.111.1111
hla2260         LV:::::::L:::M::V:SY:::F:LS:::T:G::::::VV::L:E::T:T:S:F::::M
HQ2687A         ::KY:L:::::TG:TF::::T:T:::::::::::::V:D:::T:::T::F:::S::YLF:

consensus       PNISNLHADERISQIDRLYKLVSKWIFMATLPPMLIIICFPSALIRHTFGPEYLNGALAL
#oth            .11.1..1.111111111..1.1..1111.1..1.1111..111.11...1..11.111.
hla2260         :IL:Q::S::::TEM::T::V:T:::::::::::::L:F::T:S::M::::::TD:S:::
HQ2687A         :::::::::GEW:::TH::::::::VVFV:V::F:L:S::::I::S::::T::::::PY:

consensus       VILAIGFFTHAVAGPNQRALSAIGRTRAIMLDNALAAGTNIALNFALIIEIGILGAAIAS
#oth            .1..111.111.1...111.1.1.1..1.111.1..111..1..11.1111.1....1.1
hla2260         :T::L:::::S:::::VNT:T::::::I::W::L::GV::::::::::P:Y::::::V:T
HQ2687A         :::::SY:VM::T:::::::::F:D::::F:V::::::V::T::YF:L:L::T:::::::

consensus       AVSLAGLNLLYSARLYRQTNIHPMSAALMKPAIAGTLSIVGITTYAITRMTIGLPSLDGI
#oth            1..111111...11..1111.1.111..1..111..111.1.11.111.1111111.111
hla2260         :::Y::::V::::Q:::::G::::T:::F:::::::::M:::Y-:VV::F------::TT
HQ2687A         S:::IIVQ::::Y:::TIY::S:F:W:::::--I::FV::T::::::V:::::::::L::

consensus       APVLMGAGIVFVSLYSIAIIALGGIQEDDIMLVRSAEQRLGINLEPLKRIARRFMDE
#oth            1...111..1111..1.1.111...1.11....1.1.111.11.1.1..1..1.111
hla2260         ::::V:M::::::::::::L:::::E:EE::::L:F:E:F:VD:G:F::V::F:V::
HQ2687A         I::::F:::----::T:I::VF::::::::::::::::S::::::::::::::::--