2 genomes BUD4400 3 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - - - - - - - NP3712A HQ2954A HQ3237A

Pairwise sequence scores
Consensus score	3219	HQ2954A	NP3712A	HQ3237A
2950	HQ2954A	3211	2828	2861
3086	NP3712A	2828	3214	2996
3121	HQ3237A	2861	2996	3223

412 symbols
consensus       MKHTLRFRAYLSDDVASEAWRHIDILRQIRNHAVRDYYNSDYNDRPSDYDQHSKLKDWTD
#oth            ........1..1.......................1..11...11.......1111...1
HQ2954A         ::::::::V:::::::::::::::::::::::::::::R::::N::::::::NTFT:::E
NP3712A         :::::::::::P:::::::::::::::::::::::::::A::::::::::::::::::::
HQ3237A         :::::::::::::::::::::::::::::::::::G::::::::K:::::::::::::::

consensus       QWPTFADPSQHAAQQAISQIHSDLETLQERRNEGYDVGRLQWQGAGEFRSVSYNQSSRFN
#oth            1.11..1................11..1....1.1........12..........11.1.
HQ2954A         R:SI::E:::::::::::::::::V:::::::N:S::::::::AK:::::::::::::::
NP3712A         :::::::::::::::::::::::I:::::::::::::::::::::::::::::::A::::
HQ3237A         :::::::::::::::::::::::::::K::::::::::::::::N:::::::::::R:W:

consensus       VDYNTGDDRFVRLRLEKIGWFKIRADRDVPPAENIDEVILKKETTGEWYVSLVTTVEDTP
#oth            ..1.1..1......1......1......1..212..1.......................
HQ2954A         ::H::::N::::::V:::::::::::::I::VDE::K:::::::::::::::::::::::
NP3712A         :::::::::::::::::::::::::::::::E:D::::::::::::::::::::::::::
HQ3237A         ::::A::::::::::::::::N::::::::::::::::::::::::::::::::::::::

consensus       EKPPLSEIEPEDCVGVDLGITSYIHTSENLSVDTLDLSNEYDRYAREQRKLDRKEHGSAN
#oth            1.....1..1.1.....................1.1..2.....................
HQ2954A         D:::::Q::::N:::::::::::::::::::::M:E::::::::::::::::::::::::
NP3712A         :::::::::A::::::::::::::::::::::::::::D:::::::::::::::::::::
HQ3237A         ::::::::::::::::::::::::::::::::::::::E:::::::::::::::::::::

consensus       WEKQRRKVAQAKRTIKRKVRDYQHKLTTWLVTEYDVVAVEDLDVKPMLETSQNAKNKQDA
#oth            .....1.......1.....1.............1............11.1..........
HQ2954A         :::::::::::::::::::C::::::::::::::::::::::::::I:::::::::::::
NP3712A         :::::Q:::::::K:::::::::::::::::::H:::::::::::::::A::::::::::
HQ3237A         :::::::::::::::::::::::::::::::::::::::::::::::M::::::::::::

consensus       AWSRFIELLEYKADLHGTHVEKVKPEGTTKECAVCGVETAKPIWVREHSCPACGHTEDRD
#oth            ...1.1...............1...1...............................1..
HQ2954A         :::::L::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP3712A         :::Q:::::::::::::::::T:::G:::::::::::::::::::::::::::::::A::
HQ3237A         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       LNAAKNILYRGLKQLGAGRSESTPVQTALPTFTPHREAVDAKRVVEAGSPGA
#oth            ........1...1..........1.......1..11...1....1.1.....
HQ2954A         ::::::::N::::::::::::::S::::::::::::::::::::I:P:::::
NP3712A         :::::::::::::::::::::::::::::::L:::::::S::::::::::::
HQ3237A         ::::::::::::T:::::::::::::::::::::RS::::::::::::::::