1 genomes BUD4473 3 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - pNG4039 pNG5145 rrnB0111 - - - - - - -

Pairwise sequence scores
Consensus score	736	rrnB0111	pNG4039	pNG5145
590	rrnB0111	742	578	541
708	pNG4039	578	734	664
687	pNG5145	541	664	738

99 symbols
consensus       MTTRPTAGEIVAITTTDSEPLLLVCRATDEHVTGILLADLATETLQRLRASEPDTATRQQ
#oth            ..11..1...1...........1.1.11...1..1.......11.......111.1..1.
rrnB0111        ::AP::V:::I:::::::::::::S::::::I::V::::::::P:::::::KRN:P::R:
pNG4039         ::::::::::::::::::::::::::Q:::::::::::::::::::::::::::::::::
pNG5145         ::::::::::::::::::::::F::::N::::::::::::::D:::::::::::::::::

consensus       LAQAIGRTNELLSFTVPHTECALVERDSSRPNPFEGGDA
#oth            ........1..1.....2.1......1....21....11
rrnB0111        ::::::::D::M:::::T:D::::::::::::C:::::D
pNG4039         :::::::::::::::::L:::::::::::::D:::::::
pNG5145         ::::::::::::::::::::::::::A::::G:::::G: