Home |  Text search
1 genomes BUD4474 2 proteins
a Hsa
Halobacterium
sp. NRC-1		 b Hma
Haloarcula
marismortui		 f Hvo
Haloferax
volcanii		 g Hbo
Halogeometricum
borinquense		 h Hmu
Halomicrobium
mukohataei		 i Hut
Halorhabdus
utahensis		 j Hla
Halorubrum
lacusprofundi		 q Nph
Natronomonas
pharaonis		 x Hwa
Haloquadratum
walsbyi
-

pNG1024

rrnAC1053

 - - - - - - -

Pairwise sequence scores
Consensus score3210 pNG1024 rrnAC1053
2355pNG1024 3017 1679
2534rrnAC1053 1679 3188 

424 symbols
consensus       MSPENKICMEQDEDDDLDAGDELFNEVDQDGKGEIFANREILNIDHVPDENRIVGRDEQI
#oth            1111111111111.1111.1111.11.111.1.1..11..1.1..1..1.........1.
pNG1024         ----------M:S::ESE:VHSV::T:S:E:-:K::EQ::::Q::Y::S:::::::::::
rrnAC1053       :::::::::::S::G:::::::::E:::G:::::::::::L:::::::::::::::::H:

consensus       EELANEIGPAVTGQPPNSIIIYGKTGCGKSLVANHVMERARREAQRRDRRLATGTVNCAQ
#oth            111.1....1.1.1....1.1.....1......1..111..1..11.111...11.1.1.
pNG1024         :KV:G::::I:V:::::::::::::::::::::K::SKI::E::EN:GVK::::Y:::Q:
rrnAC1053       T::::::::::::S::::V:L:::::S::::::::::::::::::::::::::V::D:::

consensus       ARGNADALQKIARAINRPESGVKFPTRGISENEYFNRLWQILNEEYDAAIITLDEVDRLN
#oth            11.11.11111111..111...11......1...11.1.11.111....1.1.....1.1
pNG1024         :K::S:::S:YG::::P::::::::::::::::::E:V:SV:::F::::::V:::::K::
rrnAC1053       S::E::TV:T::DK:::ST:::TV::::::T:::Y:::::::GT:::::L:::::::::S

consensus       NDDILMALSRAREAGKVDVPIGIIAISNKINFRDQMSERTKSSLGHNEMIFDPYDADQIR
#oth            1..1..1....1.1.1......1.11...1.1.11.1..1...1....1..1...11.1.
pNG1024         :::L:::::::G:D:S::::::V::V:::::Y::K::::::::F::::F::E::::::::
rrnAC1053       D:::::I:::::::::::::::::S::::V:::E::T::V:::::::::::::::GE:L:

consensus       QILQNRKDAFADDILDDGVIPRAAALAAQRHGDARKAIRLLRHAGDQANKNNAERVKESH
#oth            1..1..1...1111.11....11...1.11.......1....1...1.111.111.....
pNG1024         E:::::T:::::GV::::::::::::S:KE:::::::M::::Y:::::::E:::::::::
rrnAC1053       :::E::::::QE:::MP::::KT:::::::::::::::::::::::Y:KT::IGT:::::

consensus       LEDARAQAEVDRLLELISGLPPHSKHVLLALANLTDNHPNSRDWFRTTRIRDIYEEVCDR
#oth            .11.111...1..1...........1..1......11111111....111111.1...11
pNG1024         :T::::S::::::::::::::::::::::::::::K:::D-:E::::V:V:E::L:::::
rrnAC1053       ::L:QE::::E::K:::::::::::Y::Y:::::::GTT::N::::::V:Y:V:::::KT

consensus       EAADPLSADRIRQLLNELAFLEIAESRREHGEMGKGHYKQHRLLWDANIVLKLNNGSAQV
#oth            111.1.11111.1.....1...111.1111.11...1.1111....111.1111111111
pNG1024         SG::::::E:T:::::::C:::V:G:::GT::-:::::S:YT:::::D:::T:G:-----
rrnAC1053       ::T:T:TT:T::G::::::::::T::NQ:::G::::T::E::::::P:V:F:M:P:::::

consensus       DTDR
#oth            1111
pNG1024         ----
rrnAC1053       ::::