Home |  Text search
1 genomes BUD4489 2 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC0075

rrnAC0848

- - - - - - -

Pairwise sequence scores
Consensus score5745 rrnAC0075 rrnAC0848
4014rrnAC0075 5462 2326
4057rrnAC0848 2326 5615

764 symbols
consensus       MTPEMAAIADARIRILHVDDDPDDADMAATALERENNRFDVQTARSADAALARLAANDID
#oth            111111111111111.1.11111111111.1....11.11.1..111111111..1111.
rrnAC0075       ::::T:GVG:::V:V:Y:GT:S::TETLS::::::::::T:E:::TV:E:M:::::EPV:
rrnAC0848       ----:T:::ET-:C::::::E:GF::::::F::::DD:V:::::T::T:G:EI::D::::

consensus       CLVSDYRLPNRNGIQLLEAVRDEYGALPFIIYTAQGSEAIASDAISAGVTDYLRKEPGAD
#oth            .1....11111...11..1..1..11....1..11...11..1..........1..1.11
rrnAC0075       ::::::::S:G:::E:::T:::::P::::::::::::::V::E::::::::::::::::K
rrnAC0848       :V::::DM:E:::::F:::::E:::S::::L::GK:::E::::::::::::::Q::S:T:

consensus       QYAGLANRISNAVDHQRSQRAVSERNRALDAYERMINSAQEAACILDADDRFEIVNEAIA
#oth            ...1.....11..111.111111....1.1111111111..111.1.1111.11...11.
rrnAC0075       ::::::::::D::::S:::Q:::::::::QS::::V::M::::::Y::E::::::::T::
rrnAC0848       :::V:::::T:::ES::VK:---::::Q:::----:ET:::GIS:::E:GE:IF::::Y:

consensus       DLYDTERNELRGRHSRLLPRIRAEDEPRCYDDILDGTREEASGEIEGEFPGHRAAGSAFQ
#oth            11.11111.11.1111.1111.1.11111.111.1111111..1111111.111111111
rrnAC0075       EW:::T::::E:QT:::V::::::G:TD::QEL::::::KL:::::T:::::GH:VV:Y:
rrnAC0848       :::GY:PE:M::::WE::--Y:D::I::I:::::PTV--::::YWT:TTT:L::D::T:T

consensus       EDHLLARGDRDEIVCTARDISDQRDRERELLRNKRAIDEAPVGITITDPNQEDNPIIYAN
#oth            1111111111111.111..111.111.1..1.1...1......1...1.1.1.1.11...
rrnAC0075       LTP:VVD:TI:G::GV:::VTE:KE::::::::::::::::::V:::::::P:::L::::
rrnAC0848       :::V:::T::G:L:::V::::::::G:Q::S:I:::M::::::::::G:K:::T::S:::

consensus       RQFRELTGYSEPELRGRNCRILQGENTDAEPVDALRAAIDADEQVSVELRNYRKDGTEFW
#oth            1111.....111.11.1...1....1.11.....1.1....1.1.............1..
rrnAC0075       DHY:::::::L:::L:K:::::::::::P:::::::D::::G::::::::::::::::::
rrnAC0848       :::L:::::T:S:V::::::F::::E:E::::::M::::::::P:::::::::::::M::

consensus       NRVRIAPVRDNDGTVVNYVGFQRDITERKRRERRLEALSERLQALLQANSRDEIAEIDAD
#oth            .1.1......1...........1.1....11.1..111.11111.111111111111111
rrnAC0075       ::::::::::D:::::::::::Q:T:::::::K:::ET:S::E::FE-::P:M:DVL:::
rrnAC0848       :Q:S:::::::::::::::::::::::::EH::::K::::SV:D::::DT:E:V:::GVE

consensus       GARCELNQRANAEHGYNEAERLGRPIAAFDGIFDLAEDLQTQLPGDSIAWRVYESGDALA
#oth            111111111111111.1.1.111111111.111.11..11.111.111111111111111
rrnAC0075       :TI::V:::FC::L::D:S:V:::S:WE::LM::-:::V::::S:-------------FS
rrnAC0848       T::TV:GLE::TI:L::::::TLE:V::S:::Y::L:::P:FT:::::::::::::::::

consensus       VDDRRADEDIYNRRDGIKMELELHLGRHNILLAGEDRNAAIDQRDIILGEILAGHIISAL
#oth            ..11111111.1111111111111.1.1111.1.11111.111..111111111111111
rrnAC0075       ::E::KF:GL:E::::ST:SV:V::L:F:--:E::::FL::S-:::T-------------
rrnAC0848       :::VH::P::::PDTP::S::Y:P::::G:::::SGT:::F::::V::::::::::::::

consensus       KQVEGTEQRRDRERDLEQQNDRLEAFASVVSHDLRNPLNVARGRLQLAREQSDSEHIAAI
#oth            11111111111..11...1.11..1.1...........1..1.1.1.1..111...11.1
rrnAC0075       -------E:KE::QE:::::EQ::Q:::::::::::::T::::Q:E:L::E::::::D::
rrnAC0848       ::::::::L:::::::::H:::::::T::::::::::::::Q:::::::::YE:::L::V

consensus       DQAHQRMDTLIDDLLTLARDGASPADRESVALAQLAQNCWQNVDTAAATLRTDIDRPIRA
#oth            11..1......1......1..11111111.1.111111..11.1.11...1.....111.
rrnAC0075       :T:::::::::::::::::::::::SPVV:D:E:FV:T:::::::K::::::::::::::
rrnAC0848       E:::E::::::T::::::Q::ETVT::::::::S::E:::TT:E::D:::V:::::TVL:

consensus       NESRLRQLFENLVRNAVEHAGADVSVTVGALADGFYVADNGAGIPEDEREDVFEAGYSTA
#oth            1....1.............1.1..1....1.1.....1.1.1....1..11..1.....1
rrnAC0075       D::::::::::::::::::G:D:::::::E:::::::E::::::::P::G:::S::::::
rrnAC0848       :::::K::::::::::::::::::T::::::D:::::::D:P::::::::T::::::::S

consensus       TEGTGFGLSIARQVAAAHDWEIRVRDGADGGARFEITDVDACDE
#oth            1.........111..1..1.111.111....1...1.1.11111
rrnAC0075       V:::::::::VK:::D::G:TV::VS:::::::::F:::::VS:
rrnAC0848       ::::::::::::K:::::::::S:::S::::T:::::G:SF::S