1 genomes BUD4493 2 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC0301 rrnAC2945 - - - - - - -

Pairwise sequence scores
Consensus score	3493	rrnAC0301	rrnAC2945
2366	rrnAC0301	3367	1278
2405	rrnAC2945	1278	3487

465 symbols
consensus       MGPKPVLLIAADGAAGAQLQAALADAAADATYDSAEPDCFDTTLLRSAFDALVLPETCDG
#oth            .1111..11111111111.11..1111111.111111111.1..1111111..1.1.11.
rrnAC0301       :S:PT:::::TET:::E::::::EQ::I:::V:T:::E:V::::::T:V:C::V:V::E:
rrnAC2945       ::S::::VVT:::LDT:T:ES::::TP:SI::L:DLT:L::-::TH:V:H:::::::V::

consensus       QAGGDIAEAARGLFPDLPVIIYGEAADAGGDIQEVAADDLGSARLAAAVAEALRNSLGAE
#oth            11.111.11111.1......11.11111111111.1.1111.11.11..1..111.1111
rrnAC0301       M:::HL::::T::Y::::::M::S:::R::H::T::::::::PE:::::G:::E::----
rrnAC2945       :S:T:::YGV:T:::::::::V::DPE:VP:TL::T:VE-P::::ED:::::V:D:::::

consensus       PETMAARPASRMETILASLFNRNPDHLYAKDDDARHLLLNRGFNAPPDRLGRRDEDGLEA
#oth            11.1.1..1.11..1.111.11111...1..111111..111111.111..11.111111
rrnAC0301       -::::::::::P:::::TM:E::SE:::V::T:RHY::::DSSY:::EL:::::::::P:
rrnAC2945       :P:V:G::P:P:::L:L::::EL:::::::::Q:::V::G::::E:T::::LT:VEVP:L

consensus       AAEHARAARRDDLDVINDETDRLDVEEFLDLDAKHLRTRKMPWYDETDDLAGIIGHTQDI
#oth            111111..11.111..111..111.1..11111111..1.1....1.1111.1..1...1
rrnAC0301       G:TYLD:::G:::Q::::G::I:::H::SPSMG:::::S:V:::::::E:::L::I:::V
rrnAC2945       :E::::::L::EM:::EE::::VE:::::::::SYV:::::::::S:G:VQ:::::::::

consensus       TDRKERERALRRQNERLRKVALLAAHELRNELQIATGRLEQIAADDEHTAAIARSIDQIS
#oth            ..1.1..111.1....11....1.1........111.1.111111.11111111.11.1.
rrnAC0301       ::Q:::::L::Q:::::::::::::::::::::VS::H:S::E:::::VD:VE:::::L:
rrnAC2945       ::::L::H:F::::::MV::::V:S::::::::::Y::::EL:DC:GP::D::E:LS:::

consensus       AIIDKVVELASSDPNGPVQHAEIEQTFEREQQWLSRLSRDVWDSLADEAACLEFDGDRRI
#oth            1.1.1..1.11..1111111111111111.11...11111..11.1111.1.1111.1.1
rrnAC0301       G:V::::S:::::S----------P:::P::::::TVVW:::S::SL:::S::VTS:::L
rrnAC2945       ::::T::::ST::::::::::::::VPK::HV:::::::E:::T:::SE:::T::::T::

consensus       LADAESARLLLQILLQNALEHAGPDVAIRVGATADGFFVADDGPGIDVEPPERVFDAGHA
#oth            1..1..11.111..11..1..1..1.111..1.11..........1..1......1..11
rrnAC0301       ::::::M::FVE:::S::V::G:::::::::::SS::::::::::V::S::::::E::Y:
rrnAC2945       V::Q:::G::::::F:::::::::S:TVT::L:::::::::::::::::::::::::::T

consensus       AEAQNSGFGLYIARRIAADQGWSLSAADSENGGARFDIGNVDRPD
#oth            1111.1.....1.1.1.111..111111..1.....1111.11.1
rrnAC0301       S:K::::::::::N:::KEH:::::VG:::::::::TVTD:E:::
rrnAC2945       :V:E:T:::::V:::V::::::TVT::E::S:::::::::::C:E