|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2964 | VNG1233 | HQ3353A | hla1920 | Hbo0233 | HVO_1309 | NP3076A | Hut1194 | rrnAC0322 | Hmu1219 |
1961 | VNG1233 | 2981 | 1536 | 1634 | 1685 | 1720 | 1705 | 1628 | 1658 | 1675 |
2065 | HQ3353A | 1536 | 3141 | 1575 | 1907 | 1846 | 1769 | 1834 | 1772 | 1770 |
2139 | hla1920 | 1634 | 1575 | 2959 | 1808 | 1936 | 1830 | 1808 | 1841 | 1853 |
2220 | Hbo0233 | 1685 | 1907 | 1808 | 2941 | 2065 | 1887 | 1805 | 1894 | 1907 |
2315 | HVO_1309 | 1720 | 1846 | 1936 | 2065 | 2957 | 1937 | 1907 | 1949 | 1924 |
2256 | NP3076A | 1705 | 1769 | 1830 | 1887 | 1937 | 2976 | 1873 | 1976 | 1990 |
2176 | Hut1194 | 1628 | 1834 | 1808 | 1805 | 1907 | 1873 | 2964 | 1996 | 2033 |
2395 | rrnAC0322 | 1658 | 1772 | 1841 | 1894 | 1949 | 1976 | 1996 | 3034 | 2243 |
2445 | Hmu1219 | 1675 | 1770 | 1853 | 1907 | 1924 | 1990 | 2033 | 2243 | 2962 |
424 symbols consensus ----------------------MEPDFSALDAYLDDADADGYLIDADGSDSDQYYLSGFD #oth 111111111111122222222223112261134132624...133123452214..1..2 VNG1233 :::::::::::::::::::::::D::::Q::EF:E:SGV:::AFHD:D:N::L:::A::: HQ3353A MNANTDTDSDSNDDSSMSTELTP::::TD::T:::E:G:::::V:::::S:T:R:::::: hla1920 ::::::::::::::::::::::--MNRAR::DR:A:L:T:::::::SQD:AN:L:::::T Hbo0233 :::::::::::::::::::::::D::::P::DL:EAE::::::V:DTSHN:T:K:::::E HVO_1309 ::::::::::::::::::::::::::::P:AEF:G:-EF:::::S::::::N:L:::::: NP3076A :::::::::::::::::::::::N::L:K::::IEE::V:::::E:::ET:::R:::::T Hut1194 ::::::::::::::::::::::::::L::V:ER:AEFE:::::L::::T:PN:Q:::::: rrnAC0322 :::::::::::::MGMGARLTR::::LT:::::::::GV::::L:::SEV:::::::::: Hmu1219 :::::::::::::::::::::::D::::E:::A:::R:L::::::::STEA::::::::: consensus APDPFVTLYTGETHLLLVSALEYGRAKKEARADTVERHADYDYRSKVEEYGPREAKARVL #oth 11..1312.22352511224..1...42311.13.3.43111235443.12343134336 VNG1233 :::::FAV::PAQTGV:::P::::::S:A::::V:A::S:::LQA:R::::::A::E::: HQ3353A :::::I:I::P:KTA:::::::::::QT:S:::S:S:L:::::::I:S::NATT:::::T hla1920 G::::L:::ADGEIHV::GG::::::R:::T::::::::::::-----:::G:::RNDMY Hbo0233 :H::::::::P:KTI:::::::::::::QS:::E:R:V:E::::EL:S:H::A:::::AH HVO_1309 ::::Y:::::PAGIH::::T::F::::::S:::::S:LS:::::DNHA:H:AVVG::KTV NP3076A ::::::::::::::-:::::::::::QRT::::S:A::TE::H:ENIA::::TTG:H:T: Hut1194 :::::::::A::::::F:RS::F::::R:::::::::FV:F::DRLR::HDR:::A:::R rrnAC0322 :::::I:::D:D::::FPRS::F::::R:S::E::::YV:F:HQ::::::::D::VSH:: Hmu1219 :::::L:::D::V:::FSRS::::::N::::::::::YV:FG:Q:::::::::::VS::I consensus AAFLADHDVESVAVPERFPLGTADALRERGVAVEADTDDVVTEIRATKTDEEIEHIRAAQ #oth .51133311322331222.321..4..13325.43152332343..2.122.114123.. VNG1233 :E:V::LGC::L::G::::V:::::::DHEIT::P:E:N::ED::::::EA::::V:E:: HQ3353A :KW:QE:::KC:VT:::::::P::T:::HDLS:S:EA::I::T:::Q::ET::::::D:: hla1920 :R:VR:KG::::SM:P:G:V::::::::::IE:AV::::RIR:V::V:::::VDA::E:: Hbo0233 :E::DEY::A::LT:::::::P::G::::::::::EES:R:::::::::::::::V:::: HVO_1309 :::::::G:D:L:::AD:::::::::::E::::D:E::::L:N:::V:A:::V:R:H::: NP3076A ::::DA:G::::::::AC:A::::G:::Q::V:DV:Y:G::QS:::::::A::DN::::: Hut1194 :T::RE::::H::::P:::T::::::::QNIE:TV:H::AIETA:::::AA::D:::T:: rrnAC0322 :D:::AY::D:::::P::::R:::S::::::D:S::::GI:::::::::ET:VDYV:T:: Hmu1219 ::::DSY::::I:A:P::::S:::R::D:::T::S:DES:I::L::::::::::::ET:: consensus RANEAAMAAAEELIRAADVA------EDGTLLY-DGEPLTSERVKEEIEVTLLRHGCALD #oth 3...1..22.15.13414421111112314.4411135....21221..21..222.2.. VNG1233 ::::::::R::::::G::R-:::::::::V:VRD::Q:::::Y:RQ:::IE::::::::: HQ3353A A::::::ET:AK::NS:T:-::::::D:EI:Y:::D:I:::::I:QA::T:::Q:E:::: hla1920 :::::::R:::A::AG:E::GEGDDT:T:V::H:::DA::::::T::::::::::::::: Hbo0233 N:::E::R:::N::A::::-:::::::::::V::E:A::::::::::::::::::::G:: HVO_1309 D::::::R:::G:::D::::::::::D::::T::E:::::::::R::::::::::::::: NP3076A ::::::::R::S:LE::AA-:::::::::::::::::::::::::R:::IE:::QD:::: Hut1194 :::::::::::G:::G:A:D::::::DE:R::A:E::V::::L:R:::::::::N::::: rrnAC0322 :::::::E:::S:LE:S:I:::::::::E::EV::::T:::::::::::::::::::S:: Hmu1219 :::::::::::::L:ESRT:::::::AK:Q:::::::R:::::I:::::::::G:::::: consensus ETIVACGADAADPHDRGSGPLRADEPIIVDIFPRSKATKYHADMTRTFVVGEPDETVREW #oth 2....1.32...1.22.1..15.211111....22.312.12......33.2.2323311 VNG1233 D::::G::Q:::A:E::::::P::D:VV::::::::DS:::S::::::AN:D:SDAH::R HQ3353A :::::::S::::::N::H::IY:::::V::::::::Q:H:::::::::LR:T::::LIN: hla1920 Q::::G:VQ::::::::::::::::A::::::::::::::N:::::::C::::PA:L::: Hbo0233 D:::::::N::::::Q:::::H:::A::I:::::::E:G::::::::::K:D:S:EI::R HVO_1309 :::::::::::::::::::::::::AV:I:::::D:E:::NG:::::::K:::SPEI::: NP3076A :::::::R:::::::::::::E:G::::::::::::E:G:::::::::C::::::::E:: Hut1194 :::::::::::::::::::::V:::::::::::QD:DS::::::::::L::::::::E:: rrnAC0322 :::::::::::::::S:::::V:H::V:I::::KD::::::::::::::K:::S:::::: Hmu1219 :::::::S:::::::::::::::G:::::::::QH::S:::::::::::::::::::A:: consensus YDLTERALEAALDAIEPGATGADVHDAVCDVYEDAGEPTLRSDPSTETGFIHSTGHGVGL #oth 121.54.561.2..2.1.11.43112211121131.4212131441.1....1....... VNG1233 :AV:RA:F::::::::::V::EA:NQ::I::FD:H:Y:NVFA::D::S:::::::::::: HQ3353A FE::QN::TT:I::::::V::QYI::I:::I::N::IS::::::TA:::::::::::::: hla1920 ::::::::D:::::V::::::E:::A:A:E:::::::::F:T::E::::::::::::::: Hbo0233 F:::HE::N:::::V:::V:::::::V:::R::E::YD::::NATA:::::::::::::: HVO_1309 F::::E:F::::::V::::::K:::::::::::A:::S:::A:::A:::::::::::::: NP3076A ::::HE:QQ:::::::A::S:SE::A:::E:::A::::::::::E:::::::T::::::: Hut1194 FE::DQ:RK::I::V:::V:::E:::I:::::::::L::::::G:A:::::::::::::: rrnAC0322 :::::::M:::F::L::::::::::::::::::::::::::D:DR::::::::::::::: Hmu1219 :E::A::HA:::::::::::::E::::::::::E::Q::::::E:::::::::::::::: consensus DVHELPRVSPNGGELEPGHVITIEPGLYDPEVGGVRIEDIVVVTEDGYENLTEYPIELVV #oth 1...3.22135132.31.111.1...1.1142..1...122...21.2....4.123232 VNG1233 ::::M:A::QG:D::HA:N:::::::::E:GE::::::::::::::::::::D:E:A:TD HQ3353A ::::::::::D::K:K::::::V:::I:::T:::L:::NL::::DS:V::::T:::TPLG hla1920 ::::S::LASG:E:::::::::V:::::::::::::::::::::::::::::A::::FE: Hbo0233 :::::::IAS::E::K::::::::::::::S:::::::::A:::::::::::S::V:::: HVO_1309 ::::::SL::S:E::R:::::::::::::::I:::::::L:::::::::::::::V:::: NP3076A ::::S::::EQDA::K:::I::V:::::::T::::::::L::::::::::::D:EKQ::: Hut1194 A:::Q:S::QR::::::::I::::::::::A::::::::LL:::D::A:::::::VA:TG rrnAC0322 :::::::LA::::::::::IV::::::::SA:::::::::A:::A:::::::::E:QF:: Hmu1219 ::::::::A::::V::::::V:V::::::::::::::::F:::::::::::::::K:::: consensus ---- #oth 3111 VNG1233 :::: HQ3353A T::: hla1920 :::: Hbo0233 :::: HVO_1309 E::: NP3076A GDDA Hut1194 E::: rrnAC0322 :::: Hmu1219 ::::